RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 CCDC85BQ15834 202 aaPredicted RBP17.29■□□□□ 0.36
RAB4B-202ENST00000378307 PLA2G4FQ68DD2 849 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 NCAPH2Q6IBW4 605 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 CRIPAKQ8N1N5 446 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 SP7Q8TDD2 431 aaPredicted RBP17.29■□□□□ 0.36
RAB4B-202ENST00000378307 TMX3Q96JJ7 454 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 NAP1L4Q99733 375 aaKnown RBP17.29■□□□□ 0.36
RAB4B-202ENST00000378307 C17orf80Q9BSJ5 609 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 TMEM60Q9H2L4 133 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 SUGCTQ9HAC7 445 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 ERVK-5Q9HDB9 667 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 PRDM6Q9NQX0 595 aa17.29■□□□□ 0.36
RAB4B-202ENST00000378307 COL4A4P53420 1690 aaPredicted RBP17.29■□□□□ 0.36
RAB4B-202ENST00000378307 IGKV6-21A0A0C4DH24 114 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 NLRP11P59045 1033 aaKnown RBP17.28■□□□□ 0.36
RAB4B-202ENST00000378307 PSMC5P62195 406 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 HMGN5P82970 282 aaKnown RBP17.28■□□□□ 0.36
RAB4B-202ENST00000378307 NFX1Q12986 1120 aaKnown RBP17.28■□□□□ 0.36
RAB4B-202ENST00000378307 PAK2Q13177 524 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 GRB10Q13322 594 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 EPHA7Q15375 998 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 FAM228AQ86W67 206 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 DYDC2Q96IM9 177 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 MTMR9Q96QG7 549 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 ADAMTS10Q9H324 1103 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 ST3GAL5Q9UNP4 418 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 AKT3Q9Y243 479 aa17.28■□□□□ 0.36
RAB4B-202ENST00000378307 NLRC5Q86WI3 1866 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 ST18O60284 1047 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 MARCH6O60337 910 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 RPS6KA5O75582 802 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 P4HBP07237 508 aaKnown RBP17.27■□□□□ 0.36
RAB4B-202ENST00000378307 QARSP47897 775 aaKnown RBP17.27■□□□□ 0.36
RAB4B-202ENST00000378307 CRYBB1P53674 252 aaPredicted RBP17.27■□□□□ 0.36
RAB4B-202ENST00000378307 NPEPPSP55786 919 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 ERVK-21P61565 698 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 TBC1D8BQ0IIM8 1120 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 CTTNQ14247 550 aaKnown RBP17.27■□□□□ 0.36
RAB4B-202ENST00000378307 CALCRLQ16602 461 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 SLFN12Q8IYM2 578 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 FAM184AQ8NB25 1140 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 TGS1Q96RS0 853 aaKnown RBP17.27■□□□□ 0.36
RAB4B-202ENST00000378307 YME1L1Q96TA2 773 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 TSPYL2Q9H2G4 693 aaPredicted RBP17.27■□□□□ 0.36
RAB4B-202ENST00000378307 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.36
RAB4B-202ENST00000378307 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.36
RAB4B-202ENST00000378307 RC3H2Q9HBD1 1191 aaKnown RBP17.27■□□□□ 0.36
RAB4B-202ENST00000378307 PCDHA12Q9UN75 941 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 MTCH2Q9Y6C9 303 aa17.27■□□□□ 0.36
RAB4B-202ENST00000378307 NEMFO60524 1076 aa17.26■□□□□ 0.35
RAB4B-202ENST00000378307 MAFO75444 373 aaPredicted RBP17.26■□□□□ 0.35
RAB4B-202ENST00000378307 SLITRK3O94933 977 aa17.26■□□□□ 0.35
RAB4B-202ENST00000378307 BAG4O95429 457 aaKnown RBP17.26■□□□□ 0.35
RAB4B-202ENST00000378307 LINC00271P0C7V0 271 aa17.26■□□□□ 0.35
RAB4B-202ENST00000378307 MCM7P33993 719 aa17.26■□□□□ 0.35
RAB4B-202ENST00000378307 TXKP42681 527 aa17.26■□□□□ 0.35
RAB4B-202ENST00000378307 GPC3P51654 580 aa17.26■□□□□ 0.35
RAB4B-202ENST00000378307 CYP4A11Q02928 519 aa17.26■□□□□ 0.35
RAB4B-202ENST00000378307 SAFBQ15424 915 aaKnown RBP eCLIP17.26■□□□□ 0.35
RAB4B-202ENST00000378307 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.26■□□□□ 0.35
RAB4B-202ENST00000378307 LXNQ9BS40 222 aa17.26■□□□□ 0.35
RAB4B-202ENST00000378307 TTC12Q9H892 705 aaPredicted RBP17.26■□□□□ 0.35
RAB4B-202ENST00000378307 A0A087WWV3 80 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 CSDE1O75534 798 aaKnown RBP17.25■□□□□ 0.35
RAB4B-202ENST00000378307 POU3F3P20264 500 aaPredicted RBP17.25■□□□□ 0.35
RAB4B-202ENST00000378307 FGFR4P22455 802 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 TMOD1P28289 359 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 GATMP50440 423 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 NBR1Q14596 966 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 ZNF174Q15697 407 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 ZNF689Q96CS4 500 aaPredicted RBP17.25■□□□□ 0.35
RAB4B-202ENST00000378307 MAP7D2Q96T17 732 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 EIF2AK1Q9BQI3 630 aaKnown RBP17.25■□□□□ 0.35
RAB4B-202ENST00000378307 FTHL17Q9BXU8 183 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 BACH2Q9BYV9 841 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 CYP26B1Q9NR63 512 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 ARID2Q68CP9 1835 aa17.25■□□□□ 0.35
RAB4B-202ENST00000378307 DGKIO75912 1065 aa17.24■□□□□ 0.35
RAB4B-202ENST00000378307 IBSPP21815 317 aaPredicted RBP17.24■□□□□ 0.35
RAB4B-202ENST00000378307 TOB1P50616 345 aaPredicted RBP17.24■□□□□ 0.35
RAB4B-202ENST00000378307 NOSTRINQ8IVI9 506 aa17.24■□□□□ 0.35
RAB4B-202ENST00000378307 KSR1Q8IVT5 923 aa17.24■□□□□ 0.35
RAB4B-202ENST00000378307 C4orf19Q8IY42 314 aa17.24■□□□□ 0.35
RAB4B-202ENST00000378307 MICALL1Q8N3F8 863 aa17.24■□□□□ 0.35
RAB4B-202ENST00000378307 ADAM2Q99965 735 aa17.24■□□□□ 0.35
RAB4B-202ENST00000378307 HSD17B14Q9BPX1 270 aa17.24■□□□□ 0.35
RAB4B-202ENST00000378307 BMP2KQ9NSY1 1161 aaPredicted RBP17.24■□□□□ 0.35
RAB4B-202ENST00000378307 POTEMA6NI47 508 aa17.23■□□□□ 0.35
RAB4B-202ENST00000378307 GPR182O15218 404 aa17.23■□□□□ 0.35
RAB4B-202ENST00000378307 EIF4BP23588 611 aaKnown RBP17.23■□□□□ 0.35
RAB4B-202ENST00000378307 U2AF2P26368 475 aaKnown RBP eCLIP17.23■□□□□ 0.35
RAB4B-202ENST00000378307 YWHABP31946 246 aaKnown RBP17.23■□□□□ 0.35
RAB4B-202ENST00000378307 DSC3Q14574 896 aa17.23■□□□□ 0.35
RAB4B-202ENST00000378307 EPC2Q52LR7 807 aa17.23■□□□□ 0.35
RAB4B-202ENST00000378307 TPH2Q8IWU9 490 aa17.23■□□□□ 0.35
RAB4B-202ENST00000378307 C4orf32Q8N8J7 132 aa17.23■□□□□ 0.35
RAB4B-202ENST00000378307 CEP170P1Q96L14 293 aa17.23■□□□□ 0.35
RAB4B-202ENST00000378307 KIAA1671Q9BY89 1806 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms