RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 LRRD1A4D1F6 860 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 CTIFO43310 598 aaKnown RBP16.2■□□□□ 0.18
NPHP4-201ENST00000378156 USP11P51784 963 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 IFRD2Q12894 506 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-201ENST00000378156 CAPN12Q6ZSI9 719 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 FAM149B1Q96BN6 582 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 NLRP4Q96MN2 994 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 ZNRF3Q9ULT6 936 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 SURF1Q15526 300 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 ATP1A1P05023 1023 aaKnown RBP16.2■□□□□ 0.18
NPHP4-201ENST00000378156 FDX1P10109 184 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 ATF2P15336 505 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 BBOF1Q8ND07 529 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 ZNF526Q8TF50 670 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-201ENST00000378156 ATP2A3Q93084 1043 aa16.2■□□□□ 0.18
NPHP4-201ENST00000378156 ANO9A1A5B4 782 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 NCK2O43639 380 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 DHX9Q08211 1270 aaKnown RBP16.19■□□□□ 0.18
NPHP4-201ENST00000378156 NFRKBQ6P4R8 1299 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 NEK9Q8TD19 979 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 MSTO1Q9BUK6 570 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 TRIM9Q9C026 710 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 PHBP35232 272 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 MRPL47Q9HD33 250 aaKnown RBP16.19■□□□□ 0.18
NPHP4-201ENST00000378156 A0A1W2PQC6 194 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 GOLGA8SH3BPF8 625 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 GIPC1O14908 333 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 EVI5O60447 810 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 LPXNO60711 386 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 DYDC2Q96IM9 177 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 PBKQ96KB5 322 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 CEP72Q9P209 647 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 IPO5O00410 1097 aaKnown RBP16.19■□□□□ 0.18
NPHP4-201ENST00000378156 CRCPO75575 148 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 IFNAR2P48551 515 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 GABPAQ06546 454 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 KCNB1Q14721 858 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 KSR1Q8IVT5 923 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 ADSSL1Q8N142 457 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 ZNF710Q8N1W2 664 aa16.19■□□□□ 0.18
NPHP4-201ENST00000378156 ANKRD65E5RJM6 399 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 SLC12A2P55011 1212 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 PSMD6Q15008 389 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 ABI1Q8IZP0 508 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 GUF1Q8N442 669 aaKnown RBP16.18■□□□□ 0.18
NPHP4-201ENST00000378156 CAPN11Q9UMQ6 739 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 A6NJR5 290 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 P4HBP07237 508 aaKnown RBP16.18■□□□□ 0.18
NPHP4-201ENST00000378156 LMNB2Q03252 620 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 KCNH2Q12809 1159 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 IFT88Q13099 833 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 MEGF6O75095 1541 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 SYNJ2BP-COX16A0A087WUM0 186 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 POTEFA5A3E0 1075 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 H7C0C1 242 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 NR3C1P04150 777 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 POTEIP0CG38 1075 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 QARSP47897 775 aaKnown RBP16.18■□□□□ 0.18
NPHP4-201ENST00000378156 ATP5OP48047 213 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 VSNL1P62760 191 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 ZNF543Q08ER8 600 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 TTBK2Q6IQ55 1244 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 POTEGQ6S5H5 508 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 POTEEQ6S8J3 1075 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 C7orf31Q8N865 590 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 XXYLT1Q8NBI6 393 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 RILPQ96NA2 401 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 CCSER1Q9C0I3 900 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 COX16Q9P0S2 106 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 SHPRHQ149N8 1683 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 EIF3CLB5ME19 914 aaKnown RBP16.18■□□□□ 0.18
NPHP4-201ENST00000378156 LDHAP00338 332 aaKnown RBP16.18■□□□□ 0.18
NPHP4-201ENST00000378156 CLTAP09496 248 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 HSP90AA5PQ58FG0 334 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 EMBQ6PCB8 327 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 HHIPL2Q6UWX4 724 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 NME8Q8N427 588 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 GIMAP8Q8ND71 665 aaPredicted RBP16.18■□□□□ 0.18
NPHP4-201ENST00000378156 FAM167AQ96KS9 214 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 RUNDC3BQ96NL0 473 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 EIF3CQ99613 913 aaKnown RBP16.18■□□□□ 0.18
NPHP4-201ENST00000378156 SNX25Q9H3E2 840 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 IFT122Q9HBG6 1241 aa16.18■□□□□ 0.18
NPHP4-201ENST00000378156 CD58P19256 250 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 RNF181Q9P0P0 153 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 SUN1O94901 812 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 MAN1A1P33908 653 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 STAT3P40763 770 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 CASP7P55210 303 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 TCP11Q8WWU5 503 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 RPF1Q9H9Y2 349 aaKnown RBP16.17■□□□□ 0.18
NPHP4-201ENST00000378156 ATP6V0A4Q9HBG4 840 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 SFNP31947 248 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 RASIP1Q5U651 963 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 ALS2CLQ60I27 953 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 TRIM68Q6AZZ1 485 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 RINT1Q6NUQ1 792 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 DNAJC24Q6P3W2 148 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 LDHDQ86WU2 507 aa16.17■□□□□ 0.18
NPHP4-201ENST00000378156 TAB3Q8N5C8 712 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms