RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ZNF274Q96GC6 653 aaPredicted RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 SPATA33Q96N06 139 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 EMILIN3Q9NT22 766 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 CSE1LP55060 971 aaKnown RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 TAF1BQ53T94 588 aaPredicted RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 SMIM5Q71RC9 77 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 CEP70Q8NHQ1 597 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 KCNV2Q8TDN2 545 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 NAF1Q96HR8 494 aaKnown RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 MRPL47Q9HD33 250 aaKnown RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 FAM217BQ9NTX9 383 aaPredicted RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 GAP43P17677 238 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 EIF4A3P38919 411 aaKnown RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 NBPF20Q3BBV1 942 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 NBPF10Q6P3W6 841 aaKnown RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 PNMA3Q9UL41 463 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 ENOX1Q8TC92 643 aaKnown RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 DRC3Q9H069 523 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 TMEM206Q9H813 350 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 CACNA2D2Q9NY47 1150 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 MMP10P09238 476 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 SPZ1Q9BXG8 430 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 TRAF3IP3Q9Y228 551 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 MCF2P10911 925 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 ESRRAP11474 423 aaPredicted RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 STAT3P40763 770 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 TMEM270Q6UE05 265 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 MYRIPQ8NFW9 859 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 USP33Q8TEY7 942 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 DHX38Q92620 1227 aaKnown RBP17.45■□□□□ 0.38
RGP1-201ENST00000378078 H0Y3Z8 333 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 ATP9BO43861 1147 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 VCAM1P19320 739 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 SWSAP1Q6NVH7 229 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 TMPRSS15P98073 1019 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 FAM47EQ6ZV65 393 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 PI4KBQ9UBF8 816 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 ARHGAP10A1A4S6 786 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 USP17L5A8MUK1 530 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 CLDN3O15551 220 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 GNAT1P11488 350 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 CASP1P29466 404 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 CDK8P49336 464 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 ADCK5Q3MIX3 580 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 EFHD1Q9BUP0 239 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 PUS7LQ9H0K6 701 aaKnown RBP17.44■□□□□ 0.38
RGP1-201ENST00000378078 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 DR1Q01658 176 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 ZMAT2Q96NC0 199 aaKnown RBP17.44■□□□□ 0.38
RGP1-201ENST00000378078 AIFM3Q96NN9 605 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 SUN2Q9UH99 717 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 ANAPC7Q9UJX3 599 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 hCG_2014768A0A024R1R8 64 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 CCDC159P0C7I6 412 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 IFNA8P32881 189 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 RFX3P48380 749 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 MXI1P50539 228 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 KPNA2P52292 529 aaKnown RBP17.44■□□□□ 0.38
RGP1-201ENST00000378078 LRRC31Q6UY01 552 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 ARHGAP18Q8N392 663 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 TRIM15Q9C019 465 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 ARHGEF10O15013 1369 aa17.44■□□□□ 0.38
RGP1-201ENST00000378078 NMT2O60551 498 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 TMCC1O94876 653 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 PLEKHA8P1O95397 391 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 ZBTB17Q13105 803 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 SAAL1Q96ER3 474 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 ZC4H2Q9NQZ6 224 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 TMEM260Q9NX78 707 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 DIAPH2O60879 1101 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 WBP4O75554 376 aaKnown RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 EPB42P16452 691 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 TTLL6Q8N841 843 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 LRRC53A6NM62 1247 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 CTNND1O60716 968 aaKnown RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 MKRN4PQ13434 485 aaPredicted RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 SYTL3Q4VX76 610 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 IL31Q6EBC2 164 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 TRIM11Q96F44 468 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 RMDN3Q96TC7 470 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 CYP4F11Q9HBI6 524 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 CARMIL3Q8ND23 1372 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 NLRP11P59045 1033 aaKnown RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 PWP1Q13610 501 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 GSPT2Q8IYD1 628 aaKnown RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 RNF25Q96BH1 459 aaPredicted RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 KLC2Q9H0B6 622 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 ING2Q9H160 280 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 LMBRD2Q68DH5 695 aaPredicted RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 CCDC51Q96ER9 411 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 ALG13Q9NP73 1137 aaKnown RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 SEMA3EO15041 775 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 PAPOLAP51003 745 aaKnown RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 TBL3Q12788 808 aaKnown RBP17.43■□□□□ 0.38
RGP1-201ENST00000378078 TAF11Q15544 211 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 ZNF667Q5HYK9 610 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 C16orf87Q6PH81 154 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 TRIML2Q8N7C3 387 aa17.43■□□□□ 0.38
RGP1-201ENST00000378078 ELP3Q9H9T3 547 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms