RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 SMC1AQ14683 1233 aaKnown RBP8.84□□□□□ -0.99
CKAP2-203ENST00000378037 NR1I3Q14994 352 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 MCF2L2Q86YR7 1114 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 GOLGA1Q92805 767 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 ZNF653Q96CK0 615 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 ACSF2Q96CM8 615 aaPredicted RBP8.84□□□□□ -0.99
CKAP2-203ENST00000378037 CCDC114Q96M63 670 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 CCSER1Q9C0I3 900 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 HAUS4Q9H6D7 363 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 PSME4Q14997 1843 aa8.84□□□□□ -0.99
CKAP2-203ENST00000378037 IFNB1P01574 187 aa8.84□□□□□ -1
CKAP2-203ENST00000378037 GCFC2P16383 781 aaKnown RBP8.84□□□□□ -1
CKAP2-203ENST00000378037 QARSP47897 775 aaKnown RBP8.84□□□□□ -1
CKAP2-203ENST00000378037 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -1
CKAP2-203ENST00000378037 DAB2IPQ5VWQ8 1189 aa8.84□□□□□ -1
CKAP2-203ENST00000378037 SARM1Q6SZW1 724 aa8.84□□□□□ -1
CKAP2-203ENST00000378037 HAUS6Q7Z4H7 955 aa8.84□□□□□ -1
CKAP2-203ENST00000378037 DHX38Q92620 1227 aaKnown RBP8.84□□□□□ -1
CKAP2-203ENST00000378037 KAT5Q92993 513 aa8.84□□□□□ -1
CKAP2-203ENST00000378037 FAM163AQ96GL9 167 aaPredicted RBP8.84□□□□□ -1
CKAP2-203ENST00000378037 DHTKD1Q96HY7 919 aaPredicted RBP8.84□□□□□ -1
CKAP2-203ENST00000378037 CPA4Q9UI42 421 aa8.84□□□□□ -1
CKAP2-203ENST00000378037 FEM1BQ9UK73 627 aa8.84□□□□□ -1
CKAP2-203ENST00000378037 NOD1Q9Y239 953 aa8.84□□□□□ -1
CKAP2-203ENST00000378037 SAR1BQ9Y6B6 198 aa8.84□□□□□ -1
CKAP2-203ENST00000378037 K7ERI5 159 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 EVI5O60447 810 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 AKAP3O75969 853 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 CELF2O95319 508 aaKnown RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 MAP3K6O95382 1288 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 CLCN3P51790 818 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 DYNLT1P63172 113 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 MYL7Q01449 175 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 GPS2Q13227 327 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 TRPC3Q13507 836 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 E2F4Q16254 413 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 AMHR2Q16671 573 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 KNOP1Q1ED39 458 aaKnown RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 GLRA4Q5JXX5 417 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 SPOPLQ6IQ16 392 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 RINT1Q6NUQ1 792 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 GBP6Q6ZN66 633 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 ILDR2Q71H61 639 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 SND1Q7KZF4 910 aaKnown RBP eCLIP8.83□□□□□ -1
CKAP2-203ENST00000378037 PEX26Q7Z412 305 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 CBWD2Q8IUF1 395 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 CCDC33Q8N5R6 958 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 RNF149Q8NC42 400 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 GIMAP8Q8ND71 665 aaPredicted RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 SCFD1Q8WVM8 642 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 RIN2Q8WYP3 895 aaPredicted RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 TNFRSF25Q93038 417 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 ZBTB45Q96K62 511 aaPredicted RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 BTBD6Q96KE9 485 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 TARS2Q9BW92 718 aaKnown RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 STK17AQ9UEE5 414 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 PRDM4Q9UKN5 801 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 EMSYQ7Z589 1322 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 KIF2AO00139 706 aaPredicted RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 VIL1P09327 827 aaKnown RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 IREB2P48200 963 aaKnown RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 BACE1P56817 501 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 SYTL5Q8TDW5 730 aaPredicted RBP8.83□□□□□ -1
CKAP2-203ENST00000378037 HEMGNQ9BXL5 484 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 IMPG2Q9BZV3 1241 aa8.83□□□□□ -1
CKAP2-203ENST00000378037 LAD1O00515 517 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 AFPP02771 609 aaKnown RBP8.82□□□□□ -1
CKAP2-203ENST00000378037 LMNB1P20700 586 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 UGCGQ16739 394 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 RBM43Q6ZSC3 357 aaKnown RBP8.82□□□□□ -1
CKAP2-203ENST00000378037 NSUN6Q8TEA1 469 aaKnown RBP8.82□□□□□ -1
CKAP2-203ENST00000378037 NLRP7Q8WX94 980 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 KRT12Q99456 494 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 SYT17Q9BSW7 474 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 TEX13BQ9BXU2 312 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 RRAGCQ9HB90 399 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 KBTBD4Q9NVX7 518 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 DNAJC12Q9UKB3 198 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 MYO6Q9UM54 1294 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 TTLL3Q9Y4R7 772 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 MYO3BQ8WXR4 1341 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 A0A1B0GTH6 734 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 TXNP10599 105 aaKnown RBP8.82□□□□□ -1
CKAP2-203ENST00000378037 MXI1P50539 228 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 HUNKP57058 714 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 IFFO1Q0D2I5 559 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 PPP2R5DQ14738 602 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 TTI2Q6NXR4 508 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 FAM160B2Q86V87 743 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 RETREG2Q8NC44 543 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 NOA1Q8NC60 698 aaKnown RBP8.82□□□□□ -1
CKAP2-203ENST00000378037 CDCA5Q96FF9 252 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 SPATA33Q96N06 139 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 DUSP9Q99956 384 aaKnown RBP8.82□□□□□ -1
CKAP2-203ENST00000378037 IDI2Q9BXS1 227 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 R3HDMLQ9H3Y0 253 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 RHOBTB3O94955 611 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 ATF7P17544 494 aaPredicted RBP8.82□□□□□ -1
CKAP2-203ENST00000378037 ATP1A2P50993 1020 aa8.82□□□□□ -1
CKAP2-203ENST00000378037 AP3B2Q13367 1082 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms