RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SPATA31A3Q5VYP0 1347 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 SGK1O00141 431 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 TULP2O00295 520 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 GHRP10912 638 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 LIG4P49917 911 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 MXI1P50539 228 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 MYO1EQ12965 1108 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 EDRF1Q3B7T1 1238 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 MYCBPAPQ8TBZ2 947 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 CASKIN2Q8WXE0 1202 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 KDM4CQ9H3R0 1056 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 ATXN2Q99700 1313 aaKnown RBP9.43□□□□□ -0.9
PCDH9-202ENST00000377865 IQANK1A0A1B0GTG1 560 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 ZBTB5O15062 677 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 MYBL1P10243 752 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 SMARCA1P28370 1054 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 USP11P51784 963 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 KRT39Q6A163 491 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 CTAGE3PQ8IX95 158 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 SCYL3Q8IZE3 742 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 SH3RF3Q8TEJ3 882 aaPredicted RBP9.43□□□□□ -0.9
PCDH9-202ENST00000377865 FAM20AQ96MK3 541 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 USP15Q9Y4E8 981 aaPredicted RBP9.43□□□□□ -0.9
PCDH9-202ENST00000377865 KRT1P04264 644 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 P4HA1P13674 534 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 RPUSD2Q8IZ73 545 aaKnown RBP9.43□□□□□ -0.9
PCDH9-202ENST00000377865 PAF1Q8N7H5 531 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 GABPB2Q8TAK5 448 aaPredicted RBP9.43□□□□□ -0.9
PCDH9-202ENST00000377865 PRMT1Q99873 361 aaKnown RBP9.43□□□□□ -0.9
PCDH9-202ENST00000377865 ZNF577Q9BSK1 485 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 FMN2Q9NZ56 1722 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 AMACRQ9UHK6 382 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 ZFP69BQ9UJL9 534 aa9.43□□□□□ -0.9
PCDH9-202ENST00000377865 GOLGA8QA0A0J9YX86 632 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 GOLGA8OA6NCC3 632 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 GOLGA8NF8WBI6 632 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 KRT14P02533 472 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 CYP19A1P11511 503 aaPredicted RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 HSD17B3P37058 310 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 FXR2P51116 673 aaKnown RBP eCLIP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 GTF2IP78347 998 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 ATG16L1Q676U5 607 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 ST13P4Q8IZP2 240 aaPredicted RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 CNPY4Q8N129 248 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 AGGF1Q8N302 714 aaeCLIP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 RASSF10A6NK89 507 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 STXBP3O00186 592 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 MEIS1O00470 390 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 ZBED4O75132 1171 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 MT-ND3P03897 115 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 GARSP41250 739 aaKnown RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 CRYMQ14894 314 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 XKR9Q5GH70 373 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 CYP4F22Q6NT55 531 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 RINT1Q6NUQ1 792 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 CYB5D1Q6P9G0 228 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 CCDC137Q6PK04 289 aaKnown RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 COL23A1Q86Y22 540 aaPredicted RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 SGSM3Q96HU1 749 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 KANSL2Q9H9L4 492 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 TBK1Q9UHD2 729 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 UBE4BO95155 1302 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 KLK7P49862 253 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 SYDE2Q5VT97 1194 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 TRPM8Q7Z2W7 1104 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 TRIM55Q9BYV6 548 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 SENP1Q9P0U3 644 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 RASA4BC9J798 803 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 E9PMD0 336 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 RASA4O43374 803 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 ESRRAP11474 423 aaPredicted RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 MYCLP12524 364 aaPredicted RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 STAT4Q14765 748 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 KAZNQ674X7 775 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 KCTD1Q719H9 257 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 LRRC37BQ96QE4 947 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 SUDS3Q9H7L9 328 aaPredicted RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 STK4Q13043 487 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 KRT81Q14533 505 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 DRAP1Q14919 205 aaPredicted RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 KLHL38Q2WGJ6 581 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 TTI2Q6NXR4 508 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 DPH6Q7L8W6 267 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 PACS2Q86VP3 889 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 HOOK2Q96ED9 719 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 RBM41Q96IZ5 413 aaKnown RBP9.42□□□□□ -0.9
PCDH9-202ENST00000377865 PPCSQ9HAB8 311 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 TRPC6Q9Y210 931 aa9.42□□□□□ -0.9
PCDH9-202ENST00000377865 FSBPO95073 299 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 BRAFP15056 766 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 CA4P22748 312 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 PSMC4P43686 418 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 CAPN12Q6ZSI9 719 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
PCDH9-202ENST00000377865 CEP120Q8N960 986 aa9.41□□□□□ -0.9
PCDH9-202ENST00000377865 SYT2Q8N9I0 419 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms