RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 GNAT1P11488 350 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 EEF1B2P24534 225 aaKnown RBP20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 TMEM35BQ8NCS4 154 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 ZBED2Q9BTP6 218 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 KIAA1586Q9HCI6 787 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 HOXC10Q9NYD6 342 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 FBXO40Q9UH90 709 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 DIS3Q9Y2L1 958 aaKnown RBP20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 ARAP3Q8WWN8 1544 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 TBC1D9BQ66K14 1250 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 PADI6Q6TGC4 694 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 KLHL8Q9P2G9 620 aaPredicted RBP20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 HLFQ16534 295 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 TMEM47Q9BQJ4 181 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 DONSONQ9NYP3 566 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 ERVK-7P63135 1459 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 ZNF699Q32M78 642 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 KRT80Q6KB66 452 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 XXYLT1Q8NBI6 393 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 RBM41Q96IZ5 413 aaKnown RBP20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 PODXLO00592 558 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 NR3C1P04150 777 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 PFKFB3Q16875 520 aaPredicted RBP20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 CEP72Q9P209 647 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 FEM1BQ9UK73 627 aa20.35■□□□□ 0.85
TBC1D4-201ENST00000377625 CCDC188H7C350 402 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 PHKA2P46019 1235 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 ANGPTL8Q6UXH0 198 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 PRPF38AQ8NAV1 312 aaKnown RBP20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 PALMO75781 387 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 CASP8Q14790 479 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 C1orf228Q6PIY5 440 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 PASD1Q8IV76 773 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 ZHX2Q9Y6X8 837 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 GCLMP48507 274 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 PAPOLAP51003 745 aaKnown RBP20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 ARL4CP56559 192 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 RNF219Q5W0B1 726 aaPredicted RBP20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 TRAIPQ9BWF2 469 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 NEDD4P46934 1319 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 ABCB6Q9NP58 842 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 TBC1D22BQ9NU19 505 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 RPS6KA4O75676 772 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 KIF19Q2TAC6 998 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 ZNF568Q3ZCX4 644 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 TRMT10CQ7L0Y3 403 aaKnown RBP20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 TBC1D10CQ8IV04 446 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 ASNSD1Q9NWL6 643 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 PIM2Q9P1W9 311 aa20.34■□□□□ 0.85
TBC1D4-201ENST00000377625 MAP3K7O43318 606 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 HUS1O60921 280 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 PRDX5P30044 214 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 SNRNP48Q6IEG0 339 aaKnown RBP20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 CRLF3Q8IUI8 442 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 GIPC2Q8TF65 315 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 MTRQ99707 1265 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 MXD3Q9BW11 206 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 ABCB11O95342 1321 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L15C9J2P7 530 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L13C9JLJ4 530 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L11C9JVI0 530 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L18D6R9N7 530 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L22D6RA61 530 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L17D6RBQ6 530 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L19D6RCP7 530 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L20D6RJB6 530 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L24Q0WX57 530 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 USP17L6PQ6QN14 398 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 LCA5Q86VQ0 697 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 HEMGNQ9BXL5 484 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 TDRD3Q9H7E2 651 aaKnown RBP20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 ZRANB2O95218 330 aaKnown RBP eCLIP20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 RECQLP46063 649 aaPredicted RBP20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 FOXD4Q12950 439 aaPredicted RBP20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 TWF2Q6IBS0 349 aaKnown RBP20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 FRA10AC1Q70Z53 315 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 SCN4BQ8IWT1 228 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 SIRT2Q8IXJ6 389 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 UPF3AQ9H1J1 476 aaKnown RBP20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 INTUQ9ULD6 942 aa20.33■□□□□ 0.85
TBC1D4-201ENST00000377625 NSUN2Q08J23 767 aaKnown RBP eCLIP20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 TFDP2Q14188 446 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 TMEM270Q6UE05 265 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 RAD54LQ92698 747 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 FAM213AQ9BRX8 229 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 ANLNQ9NQW6 1124 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 GJB4Q9NTQ9 266 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 COPEO14579 308 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 CLCN6P51797 869 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 RNF168Q8IYW5 571 aaPredicted RBP20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 TTC17Q96AE7 1141 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 ZBTB18Q99592 522 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 FSD1LQ9BXM9 530 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 CPVLQ9H3G5 476 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 HACD3Q9P035 362 aa20.33■□□□□ 0.84
TBC1D4-201ENST00000377625 TRIM49BA6NDI0 452 aa20.32■□□□□ 0.84
TBC1D4-201ENST00000377625 MIF4GDA9UHW6 222 aaKnown RBP20.32■□□□□ 0.84
TBC1D4-201ENST00000377625 SLC16A4O15374 487 aa20.32■□□□□ 0.84
TBC1D4-201ENST00000377625 HABP4Q5JVS0 413 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms