RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 REXO1Q8N1G1 1221 aaKnown RBP21.72■■□□□ 1.07
CBWD3-204ENST00000377349 SMRP1Q8NCR6 262 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 LENG9Q96B70 501 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 LRFN2Q9ULH4 789 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 GPR32O75388 356 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 NRIP1P48552 1158 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 NDUFV1P49821 464 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 COASYQ13057 564 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 KIZQ2M2Z5 673 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 HERC4Q5GLZ8 1057 aaPredicted RBP21.71■■□□□ 1.07
CBWD3-204ENST00000377349 ZNF746Q6NUN9 644 aaPredicted RBP21.71■■□□□ 1.07
CBWD3-204ENST00000377349 SLC24A5Q71RS6 500 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 RASGRP4Q8TDF6 673 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 BBXQ8WY36 941 aaPredicted RBP21.71■■□□□ 1.07
CBWD3-204ENST00000377349 PPP1R16BQ96T49 567 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 OSMRQ99650 979 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 ZNF577Q9BSK1 485 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 C1orf112Q9NSG2 853 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 MUTYHQ9UIF7 546 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 PCDHB7Q9Y5E2 793 aa21.71■■□□□ 1.07
CBWD3-204ENST00000377349 PRPF3O43395 683 aaKnown RBP21.7■■□□□ 1.06
CBWD3-204ENST00000377349 IBSPP21815 317 aaPredicted RBP21.7■■□□□ 1.06
CBWD3-204ENST00000377349 PDIA3P30101 505 aaKnown RBP21.7■■□□□ 1.06
CBWD3-204ENST00000377349 FAM189BP81408 668 aa21.7■■□□□ 1.06
CBWD3-204ENST00000377349 DSC3Q14574 896 aa21.7■■□□□ 1.06
CBWD3-204ENST00000377349 LINC01465Q8N7H1 131 aa21.7■■□□□ 1.06
CBWD3-204ENST00000377349 POP1Q99575 1024 aaKnown RBP21.7■■□□□ 1.06
CBWD3-204ENST00000377349 VPS54Q9P1Q0 977 aa21.7■■□□□ 1.06
CBWD3-204ENST00000377349 TBKBP1A7MCY6 615 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 CPLX1O14810 134 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 VTNP04004 478 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 CIITAP33076 1130 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 CRYBB1P53674 252 aaPredicted RBP21.69■■□□□ 1.06
CBWD3-204ENST00000377349 SETQ01105 290 aaPredicted RBP21.69■■□□□ 1.06
CBWD3-204ENST00000377349 RBM23Q86U06 439 aaKnown RBP21.69■■□□□ 1.06
CBWD3-204ENST00000377349 RNF135Q8IUD6 432 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 PPP2R3CQ969Q6 453 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 CWH43Q9H720 699 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 TBC1D22BQ9NU19 505 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 TCEAL9Q9UHQ7 104 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 BARX2Q9UMQ3 279 aaPredicted RBP21.69■■□□□ 1.06
CBWD3-204ENST00000377349 CACNA1HO95180 2353 aa21.69■■□□□ 1.06
CBWD3-204ENST00000377349 KMT2EQ8IZD2 1858 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 DENND3A2RUS2 1198 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 GPR182O15218 404 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 FGFR1P11362 822 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 GNA11P29992 359 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 RBM10P98175 930 aaKnown RBP21.68■■□□□ 1.06
CBWD3-204ENST00000377349 TOB2Q14106 344 aaPredicted RBP21.68■■□□□ 1.06
CBWD3-204ENST00000377349 NTRK3Q16288 839 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 CSPP1Q1MSJ5 1256 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 HFE2Q6ZVN8 426 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 SMAP1Q8IYB5 467 aaPredicted RBP21.68■■□□□ 1.06
CBWD3-204ENST00000377349 TRIM22Q8IYM9 498 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 FBXL16Q8N461 479 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 CCDC148Q8NFR7 591 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 VN1R2Q8NFZ6 395 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 AGXT2Q9BYV1 514 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 ZSWIM6Q9HCJ5 1215 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 RNF19AQ9NV58 838 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 TYW1Q9NV66 732 aaKnown RBP21.68■■□□□ 1.06
CBWD3-204ENST00000377349 PCDHA10Q9Y5I2 948 aa21.68■■□□□ 1.06
CBWD3-204ENST00000377349 FSCN2O14926 492 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 ZNF862O60290 1169 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 FGF18O76093 207 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 CLCN3P51790 818 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 ERVFC1P60507 584 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 UBE3AQ05086 875 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 PRR16Q569H4 304 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 CKAP2LQ8IYA6 745 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 COLGALT1Q8NBJ5 622 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 RNF26Q9BY78 433 aaPredicted RBP21.67■■□□□ 1.06
CBWD3-204ENST00000377349 ADAMTS10Q9H324 1103 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 PDRG1Q9NUG6 133 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 TMEM161AQ9NX61 479 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 GABBR1Q9UBS5 961 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 PCDHB12Q9Y5F1 795 aa21.67■■□□□ 1.06
CBWD3-204ENST00000377349 LOC730098B7Z3J9 87 aa21.66■■□□□ 1.06
CBWD3-204ENST00000377349 NLRP5P59047 1200 aa21.66■■□□□ 1.06
CBWD3-204ENST00000377349 SSRP1Q08945 709 aaKnown RBP21.66■■□□□ 1.06
CBWD3-204ENST00000377349 ODR4Q5SWX8 454 aa21.66■■□□□ 1.06
CBWD3-204ENST00000377349 MCTP2Q6DN12 878 aa21.66■■□□□ 1.06
CBWD3-204ENST00000377349 TRMT1LQ7Z2T5 733 aaKnown RBP21.66■■□□□ 1.06
CBWD3-204ENST00000377349 METTL13Q8N6R0 699 aa21.66■■□□□ 1.06
CBWD3-204ENST00000377349 BICD2Q8TD16 824 aa21.66■■□□□ 1.06
CBWD3-204ENST00000377349 ELAC1Q9H777 363 aaKnown RBP21.66■■□□□ 1.06
CBWD3-204ENST00000377349 TLR9Q9NR96 1032 aa21.66■■□□□ 1.06
CBWD3-204ENST00000377349 USP34Q70CQ2 3546 aa21.66■■□□□ 1.06
CBWD3-204ENST00000377349 PER2O15055 1255 aa21.65■■□□□ 1.06
CBWD3-204ENST00000377349 PSAPP07602 524 aa21.65■■□□□ 1.06
CBWD3-204ENST00000377349 IFNAR1P17181 557 aa21.65■■□□□ 1.06
CBWD3-204ENST00000377349 CBX2Q14781 532 aaPredicted RBP21.65■■□□□ 1.06
CBWD3-204ENST00000377349 LRRC55Q6ZSA7 311 aa21.65■■□□□ 1.06
CBWD3-204ENST00000377349 USP15Q9Y4E8 981 aaPredicted RBP21.65■■□□□ 1.06
CBWD3-204ENST00000377349 KCNC3Q14003 757 aa21.64■■□□□ 1.06
CBWD3-204ENST00000377349 UGCGQ16739 394 aa21.64■■□□□ 1.06
CBWD3-204ENST00000377349 DUSP6Q16828 381 aa21.64■■□□□ 1.06
CBWD3-204ENST00000377349 SPOUT1Q5T280 376 aaKnown RBP21.64■■□□□ 1.06
CBWD3-204ENST00000377349 CASD1Q96PB1 797 aa21.64■■□□□ 1.06
CBWD3-204ENST00000377349 TLE6Q9H808 572 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms