RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 GUCY2CP25092 1073 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 CST5P28325 142 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-203ENST00000377344 SARSP49591 514 aaKnown RBP14.36□□□□□ -0.11
CBWD3-203ENST00000377344 NKX3-2P78367 333 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 PPFIA1Q13136 1202 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 EMC2Q15006 297 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 TARBP2Q15633 366 aaKnown RBP14.36□□□□□ -0.11
CBWD3-203ENST00000377344 HERC4Q5GLZ8 1057 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-203ENST00000377344 ZNF484Q5JVG2 852 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 NT5DC1Q5TFE4 455 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 CNNM4Q6P4Q7 775 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 KLHDC9Q8NEP7 349 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 VTI1AQ96AJ9 217 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 SMIM10L2AP0DMW4 78 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 SMIM10L2BP0DMW5 78 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 RFC5P40937 340 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 SOX10P56693 466 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 TYRO3Q06418 890 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 COASYQ13057 564 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 GRIK4Q16099 956 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 MYCT1Q8N699 235 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 C7orf31Q8N865 590 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 ARRDC4Q8NCT1 418 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 MCPH1Q8NEM0 835 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 SUGCTQ9HAC7 445 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 GPRC5CQ9NQ84 441 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 PAK6Q9NQU5 681 aaPredicted RBP14.36□□□□□ -0.11
CBWD3-203ENST00000377344 TBC1D7Q9P0N9 293 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 ODF2LQ9ULJ1 636 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 COL4A3BPQ9Y5P4 624 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 BRCA2P51587 3418 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 ZBTB42B2RXF5 422 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 KCNB1Q14721 858 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 TRIML1Q8N9V2 468 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 HPS3Q969F9 1004 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 DRC1Q96MC2 740 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 TIPINQ9BVW5 301 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 DHX33Q9H6R0 707 aaKnown RBP14.35□□□□□ -0.11
CBWD3-203ENST00000377344 PARVGQ9HBI0 331 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 SETD4Q9NVD3 440 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 PPME1Q9Y570 386 aa14.35□□□□□ -0.11
CBWD3-203ENST00000377344 KBTBD13C9JR72 458 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 HAS3O00219 553 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 MAFO75444 373 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-203ENST00000377344 RHOBTB3O94955 611 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 ACLYP53396 1101 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 NLRP12P59046 1061 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 ZNF445P59923 1031 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 MORC3Q14149 939 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 STX1AQ16623 288 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 FAM47CQ5HY64 1035 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 CCSAPQ6IQ19 270 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-203ENST00000377344 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 EXOC8Q8IYI6 725 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 LRRC71Q8N4P6 559 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 METTL13Q8N6R0 699 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 TMEM143Q96AN5 459 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 ZBTB10Q96DT7 871 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 ZNF333Q96JL9 665 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 CEP89Q96ST8 783 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 SLC39A2Q9NP94 309 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 XPNPEP1Q9NQW7 623 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 ANO10Q9NW15 660 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 COL1A2P08123 1366 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 NRCAMQ92823 1304 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 RRN3P2A6NIE6 340 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 GAP43P17677 238 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 KLRC1P26715 233 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 MAPK7Q13164 816 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 NBPF20Q3BBV1 942 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 DPCR1Q3MIW9 517 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 ODR4Q5SWX8 454 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 SMYD4Q8IYR2 804 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-203ENST00000377344 DAW1Q8N136 415 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 RETREG2Q8NC44 543 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 LMBR1Q8WVP7 490 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 KIFAP3Q92845 792 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-203ENST00000377344 POLR3FQ9H1D9 316 aaPredicted RBP14.34□□□□□ -0.11
CBWD3-203ENST00000377344 PDLIM7Q9NR12 457 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 LARSQ9P2J5 1176 aaKnown RBP14.34□□□□□ -0.11
CBWD3-203ENST00000377344 GDAQ9Y2T3 454 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 FRMPD3Q5JV73 1810 aa14.34□□□□□ -0.11
CBWD3-203ENST00000377344 FRMD3A2A2Y4 597 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 MOXD2PA6NHM9 499 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 C22orf31O95567 290 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 BMP6P22004 513 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 DNM2P50570 870 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 STK4Q13043 487 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 FAM26FQ5R3K3 315 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 ZNF658Q5TYW1 1059 aaPredicted RBP14.33□□□□□ -0.12
CBWD3-203ENST00000377344 EFCAB12Q6NXP0 572 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 MTHFD1LQ6UB35 978 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 ARMC5Q96C12 935 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 GLT1D1Q96MS3 346 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 FUCA2Q9BTY2 467 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 TSPY26PQ9H489 355 aa14.33□□□□□ -0.12
CBWD3-203ENST00000377344 MRPL44Q9H9J2 332 aaKnown RBP14.33□□□□□ -0.12
CBWD3-203ENST00000377344 PRDM10Q9NQV6 1147 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms