RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 MYCP01106 439 aaPredicted RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 FGGP02679 453 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 UCHL3P15374 230 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 POLGP54098 1239 aaPredicted RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 THNSL1Q8IYQ7 743 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 SUPT20HQ8NEM7 779 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 SPATA4Q8NEY3 305 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 OTUD5Q96G74 571 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 ZDHHC15Q96MV8 337 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 KMT5AQ9NQR1 393 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 KCNH7Q9NS40 1196 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
DDR1-227ENST00000376570 PVALEFA0A1B0GWK0 134 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 CCDC151A5D8V7 595 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 ASNSP08243 561 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 MYBL2P10244 700 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 CARSP49589 748 aaKnown RBP12.68□□□□□ -0.38
DDR1-227ENST00000376570 GMPSP49915 693 aaPredicted RBP12.68□□□□□ -0.38
DDR1-227ENST00000376570 LIG4P49917 911 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 BRD3Q15059 726 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 KRT71Q3SY84 523 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 DAB2IPQ5VWQ8 1189 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
DDR1-227ENST00000376570 OTUD6AQ7L8S5 288 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 NACC1Q96RE7 527 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 KCNK9Q9NPC2 374 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 ASIC3Q9UHC3 531 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 DYNLT1P63172 113 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 ORC1Q13415 861 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 GIT2Q14161 759 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 PPP4R3AQ6IN85 833 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 RINT1Q6NUQ1 792 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 AADACL2Q6P093 401 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 FLAD1Q8NFF5 587 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 GOLGA5Q8TBA6 731 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 DHX38Q92620 1227 aaKnown RBP12.68□□□□□ -0.38
DDR1-227ENST00000376570 NLRP4Q96MN2 994 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 DEFB129Q9H1M3 183 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 ANKZF1Q9H8Y5 726 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 SNX24Q9Y343 169 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
DDR1-227ENST00000376570 STRCP1A6NGW2 1772 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 DENND3A2RUS2 1198 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 GOLGA8SH3BPF8 625 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 CYP26A1O43174 497 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 KCNJ1P48048 391 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 PRELPP51888 382 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 TNNC1P63316 161 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 MUM1L1Q5H9M0 696 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 SULF1Q8IWU6 871 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 ACSF2Q96CM8 615 aaPredicted RBP12.68□□□□□ -0.38
DDR1-227ENST00000376570 TRIM51Q9BSJ1 452 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 AMFRQ9UKV5 643 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 JRKLQ9Y4A0 524 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 BCL9LQ86UU0 1499 aa12.68□□□□□ -0.38
DDR1-227ENST00000376570 PHRF1Q9P1Y6 1649 aaKnown RBP12.67□□□□□ -0.38
DDR1-227ENST00000376570 NDUFAB1O14561 156 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 ZNF263O14978 683 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 SERPING1P05155 500 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 ATF7P17544 494 aaPredicted RBP12.67□□□□□ -0.38
DDR1-227ENST00000376570 CRY2Q49AN0 593 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 ZNF772Q68DY9 489 aaPredicted RBP12.67□□□□□ -0.38
DDR1-227ENST00000376570 MOB2Q70IA6 237 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 APTXQ7Z2E3 356 aaKnown RBP12.67□□□□□ -0.38
DDR1-227ENST00000376570 CEP57Q86XR8 500 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 BCAS4Q8TDM0 211 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 MTMR9Q96QG7 549 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 P2RX7Q99572 595 aaKnown RBP12.67□□□□□ -0.38
DDR1-227ENST00000376570 SALL4Q9UJQ4 1053 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 SPATA31A6Q5VVP1 1343 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 FAM237AA0A1B0GTK4 181 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 F5H423 210 aaPredicted RBP12.67□□□□□ -0.38
DDR1-227ENST00000376570 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 MIIPQ5JXC2 388 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 ZBTB10Q96DT7 871 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 TBK1Q9UHD2 729 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 TRPC6Q9Y210 931 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 SLIT2O94813 1529 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 INO80B-WBP1J3KQ70 363 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 WNT10BO00744 389 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 EVI5O60447 810 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 MXI1P50539 228 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 UAP1Q16222 522 aaPredicted RBP12.67□□□□□ -0.38
DDR1-227ENST00000376570 CENPPQ6IPU0 288 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 ANKRD42Q8N9B4 389 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 DEPTORQ8TB45 409 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 ZNF653Q96CK0 615 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 WDR18Q9BV38 432 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 INO80BQ9C086 356 aaPredicted RBP12.67□□□□□ -0.38
DDR1-227ENST00000376570 NYAP2Q9P242 653 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 PLEKHG2Q9H7P9 1386 aa12.67□□□□□ -0.38
DDR1-227ENST00000376570 CTNNA1P35221 906 aaKnown RBP12.66□□□□□ -0.38
DDR1-227ENST00000376570 TFAMQ00059 246 aaKnown RBP12.66□□□□□ -0.38
DDR1-227ENST00000376570 SESTD1Q86VW0 696 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 IFT74Q96LB3 600 aa12.66□□□□□ -0.38
DDR1-227ENST00000376570 FUT8Q9BYC5 575 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms