RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 SEPT2Q15019 361 aa19.49■□□□□ 0.71
TUBGCP3-202ENST00000375669 TMEM266Q2M3C6 531 aa19.49■□□□□ 0.71
TUBGCP3-202ENST00000375669 GALNT17Q6IS24 598 aa19.49■□□□□ 0.71
TUBGCP3-202ENST00000375669 OSGEPQ9NPF4 335 aa19.49■□□□□ 0.71
TUBGCP3-202ENST00000375669 POTEB3A0JP26 581 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 POTECB2RU33 542 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 SHBGP04278 402 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 LDHBP07195 334 aaKnown RBP19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 VIMP08670 466 aaKnown RBP19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 FERP16591 822 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 SLC16A2P36021 539 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 PAPOLAP51003 745 aaKnown RBP19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 SLC5A9Q2M3M2 681 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 ZCWPW2Q504Y3 356 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 TBC1D9BQ66K14 1250 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 CWF19L1Q69YN2 538 aaKnown RBP19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 POTEBQ6S5H4 581 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 RBM46Q8TBY0 533 aaKnown RBP19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 ADAM7Q9H2U9 754 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 ITGB4P16144 1822 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 MEIS1O00470 390 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 KRT16P08779 473 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 CTCFP49711 727 aaPredicted RBP19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 ZNF131P52739 623 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 TAF11Q15544 211 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 MFN1Q8IWA4 741 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 TEX9Q8N6V9 391 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 TSC22D3Q99576 134 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 MTFR1LQ9H019 292 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 NSRP1Q9H0G5 558 aaKnown RBP19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 BCS1LQ9Y276 419 aa19.48■□□□□ 0.71
TUBGCP3-202ENST00000375669 PGRMC1O00264 195 aaKnown RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 CDK8P49336 464 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 PDCD2Q16342 344 aaPredicted RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 SPTY2D1Q68D10 685 aaPredicted RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 ALKBH5Q6P6C2 394 aaKnown RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 DAAM2Q86T65 1068 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 SCFD1Q8WVM8 642 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 KLHL29Q96CT2 875 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 NAF1Q96HR8 494 aaKnown RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 PRMT1Q99873 361 aaKnown RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 PAPOLBQ9NRJ5 636 aaKnown RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 INTS9Q9NV88 658 aaKnown RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 ANKIB1Q9P2G1 1089 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 CCDC188H7C350 402 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 ABCB4P21439 1286 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 USP11P51784 963 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 ZNF211Q13398 564 aaPredicted RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 LLGL1Q15334 1064 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 GALNTL6Q49A17 601 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 TRIM59Q8IWR1 403 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 SYN2Q92777 582 aaPredicted RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 GLG1Q92896 1179 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 NUCKS1Q9H1E3 243 aaKnown RBP19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 IRAK4Q9NWZ3 460 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 ABCB11O95342 1321 aa19.47■□□□□ 0.71
TUBGCP3-202ENST00000375669 PPFIA2O75334 1257 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 RTN3O95197 1032 aaPredicted RBP19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 NR2F2P24468 414 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 COBLL1Q53SF7 1204 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 SPDYCQ5MJ68 293 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 AADACL2Q6P093 401 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 ARHGAP27Q6ZUM4 889 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 PEX26Q7Z412 305 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 IRF2BP2Q7Z5L9 587 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 HAS1Q92839 578 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.46■□□□□ 0.711e-6■■■□□ 15.4
TUBGCP3-202ENST00000375669 CCDC134Q9H6E4 229 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 ARHGEF10LQ9HCE6 1279 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 FAM114A2Q9NRY5 505 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 ADAM22Q9P0K1 906 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 STK17AQ9UEE5 414 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 SRP68Q9UHB9 627 aaKnown RBP19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 CHORDC1Q9UHD1 332 aaPredicted RBP19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 STK38LQ9Y2H1 464 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 CASZ1Q86V15 1759 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 KRT18P05783 430 aaKnown RBP19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 MSH2P43246 934 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 KIF2BQ8N4N8 673 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 SEC14L1Q92503 715 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 ANKRD27Q96NW4 1050 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 RAB17Q9H0T7 212 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 NAGPAQ9UK23 515 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 STRCP1A6NGW2 1772 aa19.46■□□□□ 0.71
TUBGCP3-202ENST00000375669 EIF4E1BA6NMX2 242 aaKnown RBP19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 HGSO14964 777 aaPredicted RBP19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 COPS2P61201 443 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 GNPTABQ3T906 1256 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 PGM2Q96G03 612 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 TXLNGYQ9BZA5 131 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 GANQ9H2C0 597 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 SLITRK6Q9H5Y7 841 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 RIC8AQ9NPQ8 531 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 ARHGEF3Q9NR81 526 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 EMILIN3Q9NT22 766 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 DPPA5A6NC42 116 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 SNX3O60493 162 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 UPP2O95045 317 aa19.45■□□□□ 0.7
TUBGCP3-202ENST00000375669 FGGP02679 453 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms