RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
LSM2-208ENST00000375661 PAN2Q504Q3 1202 aaKnown RBP13.79□□□□□ -0.2
LSM2-208ENST00000375661 HEATR3Q7Z4Q2 680 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 ATP8B4Q8TF62 1192 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 SDF4Q9BRK5 362 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 BARX2Q9UMQ3 279 aaPredicted RBP13.79□□□□□ -0.2
LSM2-208ENST00000375661 PCDHA6Q9UN73 950 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 TRPC6Q9Y210 931 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 PCDHB7Q9Y5E2 793 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 PCDHA8Q9Y5H6 950 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 WDFY4Q6ZS81 3184 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 NUBP1P53384 320 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 PLCB4Q15147 1175 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 DUSP6Q16828 381 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 RBM23Q86U06 439 aaKnown RBP13.78□□□□□ -0.2
LSM2-208ENST00000375661 TRIM22Q8IYM9 498 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 SUSD6Q92537 303 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 SNX21Q969T3 373 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 MXRA8Q9BRK3 442 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 TLR9Q9NR96 1032 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 KCNH7Q9NS40 1196 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 BARHL2Q9NY43 387 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 PKD2L1Q9P0L9 805 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 ORC3Q9UBD5 711 aaPredicted RBP13.78□□□□□ -0.2
LSM2-208ENST00000375661 STK36Q9NRP7 1315 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 WDR81Q562E7 1941 aa13.78□□□□□ -0.2
LSM2-208ENST00000375661 hCG_1984214I3L0E3 225 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 ATG7O95352 703 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 DEXIO95424 95 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 COL1A2P08123 1366 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 NAPAP54920 295 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 ACTR2P61160 394 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 TMEM62Q0P6H9 643 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 TCF15Q12870 199 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 UBE2SQ16763 222 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 SPOUT1Q5T280 376 aaKnown RBP13.77□□□□□ -0.21
LSM2-208ENST00000375661 IER5LQ5T953 404 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 MTHFD1LQ6UB35 978 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 TMEM184AQ6ZMB5 413 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.21
LSM2-208ENST00000375661 RASGRP4Q8TDF6 673 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 MICAL1Q8TDZ2 1067 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 ZBTB10Q96DT7 871 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 LLPHQ9BRT6 129 aaKnown RBP13.77□□□□□ -0.21
LSM2-208ENST00000375661 TMX1Q9H3N1 280 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 ERVK-5Q9HDB9 667 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 RGS18Q9NS28 235 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 LZTS1Q9Y250 596 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 TRIOO75962 3097 aa13.77□□□□□ -0.21
LSM2-208ENST00000375661 FSCN2O14926 492 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 GPR182O15218 404 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 HBP1O60381 514 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 RPS6KA5O75582 802 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 FGF18O76093 207 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 GATMP50440 423 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 NFX1Q12986 1120 aaKnown RBP13.76□□□□□ -0.21
LSM2-208ENST00000375661 CUL4AQ13619 759 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 SLC24A5Q71RS6 500 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 ASIC4Q96FT7 647 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 RPGRIP1Q96KN7 1286 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 SNX27Q96L92 541 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 PHOX2BQ99453 314 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 ELAC1Q9H777 363 aaKnown RBP13.76□□□□□ -0.21
LSM2-208ENST00000375661 VPS54Q9P1Q0 977 aa13.76□□□□□ -0.21
LSM2-208ENST00000375661 IGKV6D-21A0A0A0MT36 114 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 DENND3A2RUS2 1198 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 SMCO2A6NFE2 343 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 TBKBP1A7MCY6 615 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 C9IYK1 514 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 K7ELQ4 463 aaPredicted RBP13.75□□□□□ -0.21
LSM2-208ENST00000375661 ADAMTS3O15072 1205 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 FOSP01100 380 aaPredicted RBP13.75□□□□□ -0.21
LSM2-208ENST00000375661 LAG3P18627 525 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 KLRC1P26715 233 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 PLCB3Q01970 1234 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 KCNC3Q14003 757 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 TMEM266Q2M3C6 531 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 ZNF484Q5JVG2 852 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 FAM160B1Q5W0V3 765 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 COLGALT1Q8NBJ5 622 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 TRAPPC12Q8WVT3 735 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 ADAM2Q99965 735 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 RIC8AQ9NPQ8 531 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 GJB4Q9NTQ9 266 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
LSM2-208ENST00000375661 PUF60Q9UHX1 559 aaKnown RBP13.75□□□□□ -0.21
LSM2-208ENST00000375661 NOC2LQ9Y3T9 749 aaKnown RBP13.75□□□□□ -0.21
LSM2-208ENST00000375661 ESYT2A0FGR8 921 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 PER2O15055 1255 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 MGEA5O60502 916 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 HOXB8P17481 243 aaPredicted RBP13.74□□□□□ -0.21
LSM2-208ENST00000375661 AVPR2P30518 371 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 FAM189BP81408 668 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 CEP55Q53EZ4 464 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 NIPA1Q7RTP0 329 aa13.74□□□□□ -0.21
LSM2-208ENST00000375661 VN1R2Q8NFZ6 395 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms