RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 GIMAP6Q6P9H5 292 aa12.42□□□□□ -0.42
ABCA1-201ENST00000374733 BTNL9Q6UXG8 535 aa12.42□□□□□ -0.42
ABCA1-201ENST00000374733 LRRN4Q8WUT4 740 aa12.42□□□□□ -0.42
ABCA1-201ENST00000374733 RMDN3Q96TC7 470 aa12.42□□□□□ -0.42
ABCA1-201ENST00000374733 ASH1LQ9NR48 2969 aaKnown RBP12.42□□□□□ -0.42
ABCA1-201ENST00000374733 AAASQ9NRG9 546 aa12.42□□□□□ -0.42
ABCA1-201ENST00000374733 LRFN2Q9ULH4 789 aa12.42□□□□□ -0.42
ABCA1-201ENST00000374733 SMG5Q9UPR3 1016 aaKnown RBP12.42□□□□□ -0.42
ABCA1-201ENST00000374733 USTQ9Y2C2 406 aa12.42□□□□□ -0.42
ABCA1-201ENST00000374733 MAST4O15021 2626 aa12.42□□□□□ -0.42
ABCA1-201ENST00000374733 MYH6P13533 1939 aa12.42□□□□□ -0.42
ABCA1-201ENST00000374733 C2orf16Q68DN1 1984 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 WDR19Q8NEZ3 1342 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 EIF3JO75822 258 aaKnown RBP12.41□□□□□ -0.42
ABCA1-201ENST00000374733 ZIC2O95409 532 aaPredicted RBP12.41□□□□□ -0.42
ABCA1-201ENST00000374733 APPP05067 770 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 IFIT2P09913 472 aaKnown RBP12.41□□□□□ -0.42
ABCA1-201ENST00000374733 CD52P31358 61 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 MGAT3Q09327 533 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 FBXO47Q5MNV8 452 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 CELF3Q5SZQ8 465 aaKnown RBP12.41□□□□□ -0.42
ABCA1-201ENST00000374733 ARHGEF16Q5VV41 709 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 TSHZ1Q6ZSZ6 1077 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 RTN4RL1Q86UN2 441 aaPredicted RBP12.41□□□□□ -0.42
ABCA1-201ENST00000374733 PNMA1Q8ND90 353 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 SYTL5Q8TDW5 730 aaPredicted RBP12.41□□□□□ -0.42
ABCA1-201ENST00000374733 LMBR1Q8WVP7 490 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 TBC1D5Q92609 795 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 ACSF2Q96CM8 615 aaPredicted RBP12.41□□□□□ -0.42
ABCA1-201ENST00000374733 IWS1Q96ST2 819 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 KCNK12Q9HB15 430 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 PARD6AQ9NPB6 346 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 NBEAQ8NFP9 2946 aa12.41□□□□□ -0.42
ABCA1-201ENST00000374733 TSPY2A6NKD2 308 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 CT47B1P0C2W7 299 aaPredicted RBP12.4□□□□□ -0.42
ABCA1-201ENST00000374733 SCG2P13521 617 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 UBA1P22314 1058 aaKnown RBP12.4□□□□□ -0.42
ABCA1-201ENST00000374733 WNT7BP56706 349 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 ATAT1Q5SQI0 421 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 ZSCAN25Q6NSZ9 544 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 TRIM50Q86XT4 487 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 TMEM57Q8N5G2 664 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 COLGALT1Q8NBJ5 622 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 FEZF2Q8TBJ5 459 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 MRPS27Q92552 414 aaKnown RBP12.4□□□□□ -0.42
ABCA1-201ENST00000374733 FRAT1Q92837 279 aaPredicted RBP12.4□□□□□ -0.42
ABCA1-201ENST00000374733 AGO3Q9H9G7 860 aaKnown RBP12.4□□□□□ -0.42
ABCA1-201ENST00000374733 IL17RBQ9NRM6 502 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 DLGAP2Q9P1A6 1054 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 PNMA2Q9UL42 364 aa12.4□□□□□ -0.42
ABCA1-201ENST00000374733 TBKBP1A7MCY6 615 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 PROS1P07225 676 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 TGM1P22735 817 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 CA8P35219 290 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 MAML2Q8IZL2 1156 aaPredicted RBP12.39□□□□□ -0.43
ABCA1-201ENST00000374733 CLASRPQ8N2M8 674 aaKnown RBP12.39□□□□□ -0.43
ABCA1-201ENST00000374733 RHPN1Q8TCX5 695 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 NETO1Q8TDF5 533 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 MLXIPQ9HAP2 919 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 NGRNQ9NPE2 291 aaKnown RBP12.39□□□□□ -0.43
ABCA1-201ENST00000374733 WNT16Q9UBV4 365 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 PUF60Q9UHX1 559 aaKnown RBP12.39□□□□□ -0.43
ABCA1-201ENST00000374733 ZMIZ1Q9ULJ6 1067 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 SIT1Q9Y3P8 196 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 CDY2AQ9Y6F7 541 aa12.39□□□□□ -0.43
ABCA1-201ENST00000374733 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.39□□□□□ -0.43
ABCA1-201ENST00000374733 SMG1Q96Q15 3661 aaKnown RBP12.38□□□□□ -0.43
ABCA1-201ENST00000374733 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.38□□□□□ -0.43
ABCA1-201ENST00000374733 NOP56O00567 594 aaKnown RBP12.38□□□□□ -0.43
ABCA1-201ENST00000374733 SLC30A4O14863 429 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 SLC3A2P08195 630 aaKnown RBP12.38□□□□□ -0.43
ABCA1-201ENST00000374733 NR3C2P08235 984 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 MYCLP12524 364 aaPredicted RBP12.38□□□□□ -0.43
ABCA1-201ENST00000374733 PMLP29590 882 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 ADAM17P78536 824 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 SP2Q02086 613 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 OTOP3Q7RTS5 596 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 TMC7Q7Z402 723 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 RSPH3Q86UC2 560 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 RGS22Q8NE09 1264 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 ATRIPQ8WXE1 791 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 FTHL17Q9BXU8 183 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 PXMP2Q9NR77 195 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 GMEB2Q9UKD1 530 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 LZTS1Q9Y250 596 aa12.38□□□□□ -0.43
ABCA1-201ENST00000374733 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 IPO8O15397 1037 aaKnown RBP12.37□□□□□ -0.43
ABCA1-201ENST00000374733 GPAA1O43292 621 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 CLASP2O75122 1294 aaKnown RBP12.37□□□□□ -0.43
ABCA1-201ENST00000374733 LRRN2O75325 713 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 GLULP15104 373 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 TAF2Q6P1X5 1199 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 TMC5Q6UXY8 1006 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 CCDC149Q6ZUS6 474 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 DNAJB3Q8WWF6 145 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 RSAD2Q8WXG1 361 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 GPKOWQ92917 476 aaPredicted RBP eCLIP12.37□□□□□ -0.43
ABCA1-201ENST00000374733 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
ABCA1-201ENST00000374733 FOXQ1Q9C009 403 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms