RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 TTC19Q6DKK2 380 aaPredicted RBP19.56■□□□□ 0.72
PHF1-201ENST00000374512 MMS22LQ6ZRQ5 1243 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 TMEM179Q6ZVK1 233 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 SEC14L1Q92503 715 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 SLC35C1Q96A29 364 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 SIX2Q9NPC8 291 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 FAM198AQ9UFP1 575 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 H0YIN7 160 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 EIF3DO15371 548 aaKnown RBP eCLIP19.56■□□□□ 0.72
PHF1-201ENST00000374512 PPP1R12BO60237 982 aaPredicted RBP19.56■□□□□ 0.72
PHF1-201ENST00000374512 TBCAO75347 108 aaKnown RBP19.56■□□□□ 0.72
PHF1-201ENST00000374512 HSD17B3P37058 310 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 MMP14P50281 582 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 RBM5P52756 815 aaKnown RBP eCLIP19.56■□□□□ 0.72
PHF1-201ENST00000374512 RNASE9P60153 205 aaKnown RBP19.56■□□□□ 0.72
PHF1-201ENST00000374512 PABPC4Q13310 644 aaKnown RBP eCLIP19.56■□□□□ 0.722e-6■■□□□ 13.1
PHF1-201ENST00000374512 SLC15A2Q16348 729 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 TATDN1Q6P1N9 297 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 METTL13Q8N6R0 699 aa19.56■□□□□ 0.72
PHF1-201ENST00000374512 NOC2LQ9Y3T9 749 aaKnown RBP19.56■□□□□ 0.72
PHF1-201ENST00000374512 VGLL3A8MV65 326 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 KRIT1O00522 736 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 MEFVO15553 781 aaPredicted RBP19.55■□□□□ 0.72
PHF1-201ENST00000374512 NPM3O75607 178 aaKnown RBP19.55■□□□□ 0.72
PHF1-201ENST00000374512 EYA4O95677 639 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 STAT1P42224 750 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 CLUL1Q15846 466 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 SPDYCQ5MJ68 293 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 LENG9Q96B70 501 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 UIMC1Q96RL1 719 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 KCNQ5Q9NR82 932 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 SLX4Q8IY92 1834 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 ASTN1O14525 1302 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 SCN9AQ15858 1988 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 SPDYE3A6NKU9 549 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 H0YGN5 161 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 PSMC6P62333 389 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 SHROOM1Q2M3G4 852 aaPredicted RBP19.55■□□□□ 0.72
PHF1-201ENST00000374512 DCAF17Q5H9S7 520 aaPredicted RBP19.55■□□□□ 0.72
PHF1-201ENST00000374512 NAA35Q5VZE5 725 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 GMCL1P1Q8NEA9 526 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 HES6Q96HZ4 224 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 MKNK1Q9BUB5 465 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 GCNT4Q9P109 453 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 PCDHAC2Q9Y5I4 1007 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 NFS1Q9Y697 457 aa19.55■□□□□ 0.72
PHF1-201ENST00000374512 F5H6K3 240 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 FAM107AO95990 144 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 CCDC172P0C7W6 258 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 LMNB1P20700 586 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 USP8P40818 1118 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 LIG3P49916 1009 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 GUCY1A3Q02108 690 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 KLRC3Q07444 240 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 TRADDQ15628 312 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 DACT2Q5SW24 774 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 AGBL2Q5U5Z8 902 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 SH3BP5LQ7L8J4 393 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 SIAH1Q8IUQ4 282 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 OTUD6BQ8N6M0 293 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 FAM114A2Q9NRY5 505 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 SAMM50Q9Y512 469 aa19.54■□□□□ 0.72
PHF1-201ENST00000374512 ZNF646O15015 1829 aaPredicted RBP19.54■□□□□ 0.72
PHF1-201ENST00000374512 TMCO5BA8MYB1 307 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 TCERG1LQ5VWI1 586 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 NT5DC3Q86UY8 548 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 FBXO11Q86XK2 927 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 BORCS6Q96GS4 357 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 GMCL1Q96IK5 515 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 DDX3XO00571 662 aaKnown RBP eCLIP19.53■□□□□ 0.721e-7■□□□□ 11
PHF1-201ENST00000374512 ECE2O60344 883 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 FSBPO95073 299 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 CYP3A4P08684 503 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 CTNNA1P35221 906 aaKnown RBP19.53■□□□□ 0.72
PHF1-201ENST00000374512 PSMC2P35998 433 aaKnown RBP19.53■□□□□ 0.72
PHF1-201ENST00000374512 ABCB5Q2M3G0 1257 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 NLRP14Q86W24 1093 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 SLC30A5Q8TAD4 765 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 ZNF473Q8WTR7 871 aaKnown RBP19.53■□□□□ 0.72
PHF1-201ENST00000374512 CCT8L2Q96SF2 557 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 AMFRQ9UKV5 643 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 RABGAP1Q9Y3P9 1069 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 NCANO14594 1321 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 UBE4BO95155 1302 aa19.53■□□□□ 0.72
PHF1-201ENST00000374512 GCNT3O95395 438 aa19.52■□□□□ 0.72
PHF1-201ENST00000374512 DAAM2Q86T65 1068 aa19.52■□□□□ 0.72
PHF1-201ENST00000374512 MYCBPAPQ8TBZ2 947 aa19.52■□□□□ 0.72
PHF1-201ENST00000374512 NAP1L3Q99457 506 aaPredicted RBP19.52■□□□□ 0.72
PHF1-201ENST00000374512 STK33Q9BYT3 514 aa19.52■□□□□ 0.72
PHF1-201ENST00000374512 VAV3Q9UKW4 847 aa19.52■□□□□ 0.72
PHF1-201ENST00000374512 RGPD3A6NKT7 1758 aaPredicted RBP19.52■□□□□ 0.72
PHF1-201ENST00000374512 RGPD4Q7Z3J3 1758 aa19.52■□□□□ 0.72
PHF1-201ENST00000374512 MEIS1O00470 390 aa19.52■□□□□ 0.71
PHF1-201ENST00000374512 TMEM253P0C7T8 217 aa19.52■□□□□ 0.71
PHF1-201ENST00000374512 IKQ13123 557 aaPredicted RBP19.52■□□□□ 0.71
PHF1-201ENST00000374512 P2RX7Q99572 595 aaKnown RBP19.52■□□□□ 0.71
PHF1-201ENST00000374512 BHMT2Q9H2M3 363 aa19.52■□□□□ 0.71
PHF1-201ENST00000374512 SERPINA10Q9UK55 444 aa19.52■□□□□ 0.71
PHF1-201ENST00000374512 UTP11Q9Y3A2 253 aaKnown RBP19.52■□□□□ 0.71
PHF1-201ENST00000374512 TNS1Q9HBL0 1735 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms