RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 TRIM50Q86XT4 487 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 CLEC10AQ8IUN9 316 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 POMGNT1Q8WZA1 660 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 ARHGEF2Q92974 986 aaKnown RBP11.43□□□□□ -0.58
PGK1-201ENST00000373316 MYCBPQ99417 103 aaPredicted RBP11.43□□□□□ -0.58
PGK1-201ENST00000373316 RIOK1Q9BRS2 568 aaKnown RBP11.43□□□□□ -0.58
PGK1-201ENST00000373316 TRIM31Q9BZY9 425 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 DCP1AQ9NPI6 582 aaPredicted RBP11.43□□□□□ -0.58
PGK1-201ENST00000373316 MRGBPQ9NV56 204 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 BAZ2AQ9UIF9 1905 aaKnown RBP11.43□□□□□ -0.58
PGK1-201ENST00000373316 CALB1P05937 261 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 ARHGAP4P98171 946 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 SGO2Q562F6 1265 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 ALKBH5Q6P6C2 394 aaKnown RBP11.43□□□□□ -0.58
PGK1-201ENST00000373316 MLXIPQ9HAP2 919 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 PPANQ9NQ55 473 aaKnown RBP11.43□□□□□ -0.58
PGK1-201ENST00000373316 ANAPC5Q9UJX4 755 aa11.43□□□□□ -0.58
PGK1-201ENST00000373316 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.43□□□□□ -0.58
PGK1-201ENST00000373316 BRCA2P51587 3418 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 CRCPO75575 148 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 CDC27P30260 824 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 SLC1A1P43005 524 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 DEUP1Q05D60 604 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 UAP1Q16222 522 aaPredicted RBP11.42□□□□□ -0.58
PGK1-201ENST00000373316 PPM1KQ8N3J5 372 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 ZMYND12Q9H0C1 365 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 MRPL40Q9NQ50 206 aaKnown RBP11.42□□□□□ -0.58
PGK1-201ENST00000373316 CFAP73A6NFT4 308 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 SETSIPP0DME0 302 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 BAG6P46379 1132 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 KIAA0825Q8IV33 1275 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 DDX56Q9NY93 547 aaKnown RBP11.42□□□□□ -0.58
PGK1-201ENST00000373316 HERC5Q9UII4 1024 aaKnown RBP11.42□□□□□ -0.58
PGK1-201ENST00000373316 IQANK1A0A1B0GTG1 560 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 USP17L3A6NCW0 530 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 USP17L4A6NCW7 530 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 CRY2Q49AN0 593 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 USP17L1Q7RTZ2 530 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 GCOM2Q9BZD3 368 aaPredicted RBP11.42□□□□□ -0.58
PGK1-201ENST00000373316 CPVLQ9H3G5 476 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 ABCB6Q9NP58 842 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 USTQ9Y2C2 406 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 PITPNM2Q9BZ72 1349 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 CCDC93Q567U6 631 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 ATG16L1Q676U5 607 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 MOXD1Q6UVY6 613 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
PGK1-201ENST00000373316 MCF2LO15068 1137 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 ABCB4P21439 1286 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 KNOP1Q1ED39 458 aaKnown RBP11.41□□□□□ -0.58
PGK1-201ENST00000373316 SHROOM1Q2M3G4 852 aaPredicted RBP11.41□□□□□ -0.58
PGK1-201ENST00000373316 TKFCQ3LXA3 575 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 FIGNQ5HY92 759 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 PDXDC1Q6P996 788 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 SHC4Q6S5L8 630 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 ACRBPQ8NEB7 543 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 LRP5O75197 1615 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 A0A087WWV3 80 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 RASGRF2O14827 1237 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 TJP3O95049 919 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 ASNSP08243 561 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 OSBPP22059 807 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 GPC5P78333 572 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 DPYDQ12882 1025 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 SEPT6Q14141 434 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 XRRA1Q6P2D8 792 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 CENPUQ71F23 418 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 HOMEZQ8IX15 550 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 EPSTI1Q96J88 318 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.41□□□□□ -0.582e-10■■■■■ 27.6
PGK1-201ENST00000373316 PSMD14O00487 310 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 TLR3O15455 904 aaKnown RBP11.41□□□□□ -0.58
PGK1-201ENST00000373316 TADA3O75528 432 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 INHBAP08476 426 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 TCP10Q12799 353 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 KLHL38Q2WGJ6 581 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
PGK1-201ENST00000373316 CRAMP1Q96RY5 1269 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 C2orf40Q9H1Z8 148 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.41□□□□□ -0.58
PGK1-201ENST00000373316 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 ZNF148Q9UQR1 794 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 A6NJR5 290 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 ALAS1P13196 640 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 PRLRP16471 622 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 ZNF354CQ86Y25 554 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 CERS5Q8N5B7 392 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 IGDCC4Q8TDY8 1250 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 SPC25Q9HBM1 224 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 ZHX2Q9Y6X8 837 aa11.41□□□□□ -0.58
PGK1-201ENST00000373316 MOCS3O95396 460 aa11.4□□□□□ -0.58
PGK1-201ENST00000373316 GOLGA8HP0CJ92 632 aa11.4□□□□□ -0.58
PGK1-201ENST00000373316 MRPS9P82933 396 aaKnown RBP11.4□□□□□ -0.58
PGK1-201ENST00000373316 NR1I3Q14994 352 aa11.4□□□□□ -0.58
PGK1-201ENST00000373316 R3HDM1Q15032 1099 aaKnown RBP11.4□□□□□ -0.58
PGK1-201ENST00000373316 SP8Q8IXZ3 490 aa11.4□□□□□ -0.58
PGK1-201ENST00000373316 RNF34Q969K3 372 aa11.4□□□□□ -0.58
PGK1-201ENST00000373316 LAMA4Q16363 1823 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms