RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ANO3Q9BYT9 981 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 LEMD3Q9Y2U8 911 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 CCDC169A6NNP5 214 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 SCNN1BP51168 640 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 PLCB3Q01970 1234 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TMEM132AQ24JP5 1023 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 CCDC38Q502W7 563 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 RNF10Q8N5U6 811 aaKnown RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 BICD1Q96G01 975 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TAF1DQ9H5J8 278 aaPredicted RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 NOD2Q9HC29 1040 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 NOC2LQ9Y3T9 749 aaKnown RBP13.1□□□□□ -0.31
NCDN-202ENST00000373243 GRIN2DO15399 1336 aa13.1□□□□□ -0.31
NCDN-202ENST00000373243 TPD52L2O43399 206 aaKnown RBP13.09□□□□□ -0.31
NCDN-202ENST00000373243 RASSF9O75901 435 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 ANP32DO95626 131 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 KLHDC7AQ5VTJ3 777 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 USTQ9Y2C2 406 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 SLIT3O75094 1523 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 PPFIA2O75334 1257 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 MTMR3Q13615 1198 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
NCDN-202ENST00000373243 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 TAB3Q8N5C8 712 aaPredicted RBP13.09□□□□□ -0.31
NCDN-202ENST00000373243 MDM1Q8TC05 714 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 ZNF384Q8TF68 577 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 RBM17Q96I25 401 aaKnown RBP13.09□□□□□ -0.31
NCDN-202ENST00000373243 FMO2Q99518 471 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 SPZ1Q9BXG8 430 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 DBNDD1Q9H9R9 158 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 PRDM16Q9HAZ2 1276 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 LMCD1Q9NZU5 365 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 RNF14Q9UBS8 474 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 SORBS3O60504 671 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 GAS7O60861 476 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 MEA1Q16626 185 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 HOOK3Q86VS8 718 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 FBXO11Q86XK2 927 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 DRAXINQ8NBI3 349 aaPredicted RBP13.09□□□□□ -0.31
NCDN-202ENST00000373243 HOOK2Q96ED9 719 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 RAB17Q9H0T7 212 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 KDM4CQ9H3R0 1056 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 TBK1Q9UHD2 729 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 SALL4Q9UJQ4 1053 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 MTUS1Q9ULD2 1270 aa13.09□□□□□ -0.31
NCDN-202ENST00000373243 TNIP1Q15025 636 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 NSMFQ6X4W1 530 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 TBC1D1Q86TI0 1168 aaPredicted RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 GPSM2P81274 684 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 GRAPQ13588 217 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 CDC37Q16543 378 aaPredicted RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 QRICH1Q2TAL8 776 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 C4orf32Q8N8J7 132 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 ANKS1AQ92625 1134 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 PNMA5Q96PV4 448 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 BLOC1S4Q9NUP1 217 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 INTS9Q9NV88 658 aaKnown RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 FLT1P17948 1338 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 NR3C1P04150 777 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 UCHL3P15374 230 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 NMT1P30419 496 aaKnown RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 CTCFP49711 727 aaPredicted RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 GLE1Q53GS7 698 aaKnown RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 SPATA21Q7Z572 469 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 UBL4BQ8N7F7 174 aa13.08□□□□□ -0.32
NCDN-202ENST00000373243 ELAC2Q9BQ52 826 aaKnown RBP13.08□□□□□ -0.32
NCDN-202ENST00000373243 AGPSO00116 658 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 MYBP10242 640 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 HARSP12081 509 aaKnown RBP13.07□□□□□ -0.32
NCDN-202ENST00000373243 MDH1P40925 334 aaKnown RBP13.07□□□□□ -0.32
NCDN-202ENST00000373243 LRRC14Q15048 493 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 MSL3Q8N5Y2 521 aaKnown RBP13.07□□□□□ -0.32
NCDN-202ENST00000373243 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 NAP1L3Q99457 506 aaPredicted RBP13.07□□□□□ -0.32
NCDN-202ENST00000373243 NSRP1Q9H0G5 558 aaKnown RBP13.07□□□□□ -0.32
NCDN-202ENST00000373243 EPN3Q9H201 632 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 ACTR5Q9H9F9 607 aaPredicted RBP13.07□□□□□ -0.32
NCDN-202ENST00000373243 NARFQ9UHQ1 456 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 DNAJC12Q9UKB3 198 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 KDM3BQ7LBC6 1761 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 RSPH10B2B2RC85 870 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 RTN3O95197 1032 aaPredicted RBP13.07□□□□□ -0.32
NCDN-202ENST00000373243 RSPH10BP0C881 870 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 ITGA4P13612 1032 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 POLD1P28340 1107 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 FAM228AQ86W67 206 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 TEKT1Q969V4 418 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 MTMR4Q9NYA4 1195 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
NCDN-202ENST00000373243 GMNCA6NCL1 334 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms