RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FASTKD5Q7L8L6 764 aaKnown RBP15.07■□□□□ 0
RAPGEF1-202ENST00000372190 CCDC84Q86UT8 332 aaPredicted RBP15.07■□□□□ 0
RAPGEF1-202ENST00000372190 GSDMAQ96QA5 445 aa15.07■□□□□ 0
RAPGEF1-202ENST00000372190 TMEM106CQ9BVX2 250 aa15.07■□□□□ 0
RAPGEF1-202ENST00000372190 TLR3O15455 904 aaKnown RBP15.07■□□□□ 0
RAPGEF1-202ENST00000372190 TTI1O43156 1089 aa15.07■□□□□ 0
RAPGEF1-202ENST00000372190 STYK1Q6J9G0 422 aa15.07■□□□□ 0
RAPGEF1-202ENST00000372190 BRD8Q9H0E9 1235 aa15.07■□□□□ 0
RAPGEF1-202ENST00000372190 ZSWIM6Q9HCJ5 1215 aa15.07■□□□□ 0
RAPGEF1-202ENST00000372190 FAM8A1Q9UBU6 413 aa15.07■□□□□ 0
RAPGEF1-202ENST00000372190 CDC25BP30305 580 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 IFRD2Q12894 506 aaPredicted RBP15.06■□□□□ 0
RAPGEF1-202ENST00000372190 WDR11Q9BZH6 1224 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 CARD9Q9H257 536 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 KIDINS220Q9ULH0 1771 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 PDE5AO76074 875 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 MAP3K10Q02779 954 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 PGBD1Q96JS3 809 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 SIKE1Q9BRV8 207 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 ELP3Q9H9T3 547 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 CDV3Q9UKY7 258 aaKnown RBP15.06■□□□□ 0
RAPGEF1-202ENST00000372190 RPAP1Q9BWH6 1393 aaPredicted RBP15.06■□□□□ 0
RAPGEF1-202ENST00000372190 LAMB3Q13751 1172 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 DCUN1D2Q6PH85 259 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 ZNF589Q86UQ0 364 aaPredicted RBP15.06■□□□□ 0
RAPGEF1-202ENST00000372190 POMGNT1Q8WZA1 660 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 FTOQ9C0B1 505 aaKnown RBP eCLIP15.06■□□□□ 0
RAPGEF1-202ENST00000372190 TRAF3IP3Q9Y228 551 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 COL4A3BPQ9Y5P4 624 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 PSAPP07602 524 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 S100A5P33763 92 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 TBC1D16Q8TBP0 767 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 RAET1EQ8TD07 263 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 RGS12O14924 1447 aa15.06■□□□□ 0
RAPGEF1-202ENST00000372190 MED14O60244 1454 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 H0Y3Z8 333 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 PDIA3P30101 505 aaKnown RBP15.05■□□□□ 0
RAPGEF1-202ENST00000372190 GRIN1Q05586 938 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 SLC9A5Q14940 896 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 ATAD3BQ5T9A4 648 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 DESI2Q9BSY9 194 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 DPH5Q9H2P9 285 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 KCNJ18B7U540 433 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 GNA14O95837 355 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 EIF2AK2P19525 551 aaKnown RBP15.05■□□□□ 0
RAPGEF1-202ENST00000372190 KCNJ12Q14500 433 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 EPHA10Q5JZY3 1008 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 KCNV2Q8TDN2 545 aa15.05■□□□□ 0
RAPGEF1-202ENST00000372190 QKIQ96PU8 341 aaKnown RBP eCLIP15.05■□□□□ 0
RAPGEF1-202ENST00000372190 INO80B-WBP1J3KQ70 363 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 MAP4P27816 1152 aaKnown RBP15.05■□□□□ -0
RAPGEF1-202ENST00000372190 OLFML1Q6UWY5 402 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 PLEKHM3Q6ZWE6 761 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 RRAGAQ7L523 313 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 GAS2L3Q86XJ1 694 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 INO80BQ9C086 356 aaPredicted RBP15.05■□□□□ -0
RAPGEF1-202ENST00000372190 CCDC90BQ9GZT6 254 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 SYTL2Q9HCH5 934 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 CD163L1Q9NR16 1453 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 SNAP23O00161 211 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 ARMCX5Q6P1M9 558 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 MYOCDQ8IZQ8 938 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 MMP19Q99542 508 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 MTMR6Q9Y217 621 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 PREX1Q8TCU6 1659 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 CNTNAP4Q9C0A0 1308 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 CFAP73A6NFT4 308 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 FAM196BA6NMK8 535 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 SPP2Q13103 211 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 KIAA1841Q6NSI8 718 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 MAP4K1Q92918 833 aa15.05■□□□□ -0
RAPGEF1-202ENST00000372190 RNF26Q9BY78 433 aaPredicted RBP15.05■□□□□ -0
RAPGEF1-202ENST00000372190 RAVER2Q9HCJ3 691 aaKnown RBP15.05■□□□□ -0
RAPGEF1-202ENST00000372190 PNMA6FA0A0J9YX94 578 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 NNTQ13423 1086 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 NDUFA5Q16718 116 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 SNRNP48Q6IEG0 339 aaKnown RBP15.04■□□□□ -0
RAPGEF1-202ENST00000372190 CDH24Q86UP0 819 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 RAPGEF5Q92565 580 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 NAF1Q96HR8 494 aaKnown RBP15.04■□□□□ -0
RAPGEF1-202ENST00000372190 NR1H4Q96RI1 486 aaPredicted RBP15.04■□□□□ -0
RAPGEF1-202ENST00000372190 NEUROG2Q9H2A3 272 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 MRPL40Q9NQ50 206 aaKnown RBP15.04■□□□□ -0
RAPGEF1-202ENST00000372190 ZSCAN32Q9NX65 697 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 PYCARDQ9ULZ3 195 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 CAMTA2O94983 1202 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 ATF2P15336 505 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 WASHC5Q12768 1159 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 GPIHBP1Q8IV16 184 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 SLC17A8Q8NDX2 589 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 CDKL2Q92772 493 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 LSG1Q9H089 658 aaKnown RBP15.04■□□□□ -0
RAPGEF1-202ENST00000372190 TMEM60Q9H2L4 133 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 TPP2P29144 1249 aaPredicted RBP15.04■□□□□ -0
RAPGEF1-202ENST00000372190 COPB1P53618 953 aaKnown RBP15.04■□□□□ -0
RAPGEF1-202ENST00000372190 ALS2CLQ60I27 953 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 SYT2Q8N9I0 419 aaPredicted RBP15.04■□□□□ -0
RAPGEF1-202ENST00000372190 TPCN1Q9ULQ1 816 aa15.04■□□□□ -0
RAPGEF1-202ENST00000372190 LRRIQ3A6PVS8 624 aaPredicted RBP15.04■□□□□ -0
RAPGEF1-202ENST00000372190 KCNK3O14649 394 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms