RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 URI1O94763 535 aaPredicted RBP15.53■□□□□ 0.08
LDB3-204ENST00000372066 CYP11B2P19099 503 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 TRIM21P19474 475 aaKnown RBP15.53■□□□□ 0.08
LDB3-204ENST00000372066 ZNF76P36508 570 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 FKBP3Q00688 224 aaKnown RBP15.53■□□□□ 0.08
LDB3-204ENST00000372066 VWA3BQ502W6 1294 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 ZCWPW2Q504Y3 356 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 MIIPQ5JXC2 388 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 POTEBQ6S5H4 581 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 SAMD3Q8N6K7 520 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 MNS1Q8NEH6 495 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 KIFC2Q96AC6 838 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
LDB3-204ENST00000372066 MRPL44Q9H9J2 332 aaKnown RBP15.53■□□□□ 0.08
LDB3-204ENST00000372066 COL6A3P12111 3177 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 MED24O75448 989 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 RARBP10826 455 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 CYLC1P35663 651 aaPredicted RBP15.52■□□□□ 0.07
LDB3-204ENST00000372066 SLC12A3P55017 1021 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.07
LDB3-204ENST00000372066 ARHGAP29Q52LW3 1261 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 FAM109BQ6ICB4 259 aaPredicted RBP15.52■□□□□ 0.07
LDB3-204ENST00000372066 LRRC55Q6ZSA7 311 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 CCDC170Q8IYT3 715 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 SYT2Q8N9I0 419 aaPredicted RBP15.52■□□□□ 0.07
LDB3-204ENST00000372066 BADQ92934 168 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 FAM161BQ96MY7 647 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 TINF2Q9BSI4 451 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 TUFT1Q9NNX1 390 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 XPNPEP3Q9NQH7 507 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 DNM3Q9UQ16 869 aa15.52■□□□□ 0.07
LDB3-204ENST00000372066 EFCAB8A8MWE9 144 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 E9PMD0 336 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 FAM86B1E9PN63 330 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 MSH4O15457 936 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 SSBP05455 408 aaKnown RBP eCLIP15.51■□□□□ 0.07
LDB3-204ENST00000372066 FAM86B2P0C5J1 330 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 COPB2P35606 906 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 MARSP56192 900 aaKnown RBP15.51■□□□□ 0.07
LDB3-204ENST00000372066 SNAP25P60880 206 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 TUBB4BP68371 445 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 KRT83P78385 493 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 SHHQ15465 462 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 EDRF1Q3B7T1 1238 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 ZNF792Q3KQV3 632 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 NCAPH2Q6IBW4 605 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 ZC3H3Q8IXZ2 948 aaKnown RBP15.51■□□□□ 0.07
LDB3-204ENST00000372066 CCDC94Q9BW85 323 aaPredicted RBP15.51■□□□□ 0.07
LDB3-204ENST00000372066 NDST4Q9H3R1 872 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 VAV3Q9UKW4 847 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 DIS3Q9Y2L1 958 aaKnown RBP15.51■□□□□ 0.07
LDB3-204ENST00000372066 PARP14Q460N5 1801 aa15.51■□□□□ 0.07
LDB3-204ENST00000372066 IGLV3-22A0A075B6J6 115 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 NDUFA10O95299 355 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 PGK1P00558 417 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 KRT18P05783 430 aaKnown RBP15.5■□□□□ 0.07
LDB3-204ENST00000372066 TAL1P17542 331 aaPredicted RBP15.5■□□□□ 0.07
LDB3-204ENST00000372066 HNRNPH3P31942 346 aaKnown RBP15.5■□□□□ 0.07
LDB3-204ENST00000372066 SNX17Q15036 470 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 RNF180Q86T96 592 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 CATSPER3Q86XQ3 398 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 HPS3Q969F9 1004 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 WDR24Q96S15 920 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 HAUS4Q9H6D7 363 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 ZNF214Q9UL59 606 aaPredicted RBP15.5■□□□□ 0.07
LDB3-204ENST00000372066 PCDHA2Q9Y5H9 948 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 COL4A3BPQ9Y5P4 624 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 MRFAP1Q9Y605 127 aa15.5■□□□□ 0.07
LDB3-204ENST00000372066 EPN1Q9Y6I3 576 aaPredicted RBP15.5■□□□□ 0.07
LDB3-204ENST00000372066 TRIM43BA6NCK2 446 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 RNF225M0QZC1 329 aaPredicted RBP15.49■□□□□ 0.07
LDB3-204ENST00000372066 IPO7O95373 1038 aaKnown RBP15.49■□□□□ 0.07
LDB3-204ENST00000372066 EYA4O95677 639 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 GHRHRQ02643 423 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 TLE2Q04725 743 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 PPP2R3AQ06190 1150 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 PPP2R5CQ13362 524 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 C9orf50Q5SZB4 431 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 C1orf53Q5VUE5 145 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 EHBP1Q8NDI1 1231 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 REPS2Q8NFH8 660 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 TRIM43Q96BQ3 446 aaPredicted RBP15.49■□□□□ 0.07
LDB3-204ENST00000372066 PCMTD1Q96MG8 357 aaPredicted RBP15.49■□□□□ 0.07
LDB3-204ENST00000372066 SLF1Q9BQI6 1058 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 WDR11Q9BZH6 1224 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 PDLIM7Q9NR12 457 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 MAP3K20Q9NYL2 800 aaKnown RBP15.49■□□□□ 0.07
LDB3-204ENST00000372066 FAM184BQ9ULE4 1060 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 PHF24Q9UPV7 400 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 CFBP00751 764 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 SPATA31C1P0DKV0 1188 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 GAP43P17677 238 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 HOXA13P31271 388 aaPredicted RBP15.49■□□□□ 0.07
LDB3-204ENST00000372066 HERC4Q5GLZ8 1057 aaPredicted RBP15.49■□□□□ 0.07
LDB3-204ENST00000372066 ZNF697Q5TEC3 545 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 POTEGQ6S5H5 508 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 NEK9Q8TD19 979 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 UBXN4Q92575 508 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 SLC5A5Q92911 643 aa15.49■□□□□ 0.07
LDB3-204ENST00000372066 GJA10Q969M2 543 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms