RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ATP6V0A4Q9HBG4 840 aa17.3■□□□□ 0.36
PRPF38B-202ENST00000370022 PRDM5Q9NQX1 630 aaPredicted RBP17.3■□□□□ 0.36
PRPF38B-202ENST00000370022 KCND2Q9NZV8 630 aa17.3■□□□□ 0.36
PRPF38B-202ENST00000370022 A0A087WWV3 80 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 STAT6P42226 847 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 EMC2Q15006 297 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 PADI6Q6TGC4 694 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 RUFY4Q6ZNE9 571 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 KCNK18Q7Z418 384 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 SYT2Q8N9I0 419 aaPredicted RBP17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 TMEM87AQ8NBN3 555 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 MCPH1Q8NEM0 835 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 TCP11Q8WWU5 503 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 DHX38Q92620 1227 aaKnown RBP17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 MAP7D2Q96T17 732 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 MTRQ99707 1265 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 NOC4LQ9BVI4 516 aaKnown RBP17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 CUEDC2Q9H467 287 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 KAT6AQ92794 2004 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 TCHHQ07283 1943 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 ALPK3Q96L96 1907 aa17.29■□□□□ 0.36
PRPF38B-202ENST00000370022 FAM237AA0A1B0GTK4 181 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 TIMP1P01033 207 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 PLA2G4BP0C869 781 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 THPOP40225 353 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 CDC42EP1Q00587 391 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 TRIM71Q2Q1W2 868 aaKnown RBP17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 IER5Q5VY09 327 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 KIAA0319LQ8IZA0 1049 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 IQUBQ8NA54 791 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 DNAJB3Q8WWF6 145 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 LARP4BQ92615 738 aaKnown RBP17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 RAD54LQ92698 747 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 ZBTB10Q96DT7 871 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 GBP4Q96PP9 640 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 TIPINQ9BVW5 301 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 SUGCTQ9HAC7 445 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 BLOC1S4Q9NUP1 217 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 KCNH3Q9ULD8 1083 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 LOXHD1Q8IVV2 1947 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 TRIM43BA6NCK2 446 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 USO1O60763 962 aaKnown RBP17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 PARNO95453 639 aaKnown RBP17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 CKBP12277 381 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 RAG1P15918 1043 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 CYP11B2P19099 503 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 SLC12A3P55017 1021 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 SH3RF1Q7Z6J0 888 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 MRPS27Q92552 414 aaKnown RBP17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 WNT8BQ93098 351 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 TRIM43Q96BQ3 446 aaPredicted RBP17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 FAM49AQ9H0Q0 323 aaPredicted RBP17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 HPSEQ9Y251 543 aa17.28■□□□□ 0.36
PRPF38B-202ENST00000370022 MKI67P46013 3256 aaKnown RBP17.27■□□□□ 0.36
PRPF38B-202ENST00000370022 M0QZ92 97 aa17.27■□□□□ 0.35
PRPF38B-202ENST00000370022 SELPP16109 830 aa17.27■□□□□ 0.35
PRPF38B-202ENST00000370022 CLCN3P51790 818 aa17.27■□□□□ 0.35
PRPF38B-202ENST00000370022 FAM26DQ5JW98 314 aa17.27■□□□□ 0.35
PRPF38B-202ENST00000370022 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.35
PRPF38B-202ENST00000370022 PDILTQ8N807 584 aa17.27■□□□□ 0.35
PRPF38B-202ENST00000370022 MAGEF1Q9HAY2 307 aa17.27■□□□□ 0.35
PRPF38B-202ENST00000370022 ARID2Q68CP9 1835 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 A0A087X0B3 334 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 SSBP05455 408 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 PFKFB1P16118 471 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 GUCY2CP25092 1073 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 MRPS6P82932 125 aaKnown RBP17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 MKRN4PQ13434 485 aaPredicted RBP17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 MXD4Q14582 209 aaPredicted RBP17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 E2F4Q16254 413 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 NAALADL2Q58DX5 795 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 RINT1Q6NUQ1 792 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 C1orf186Q6ZWK4 172 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 LRRC8DQ7L1W4 858 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 PSPC1Q8WXF1 523 aaKnown RBP17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 PANK2Q9BZ23 570 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 PPP1R12CQ9BZL4 782 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 LRRC27Q9C0I9 530 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 XPNPEP1Q9NQW7 623 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 SUCLA2Q9P2R7 463 aaPredicted RBP17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 USP25Q9UHP3 1055 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
PRPF38B-202ENST00000370022 A0A1B0GVL5 298 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 RSPH10B2B2RC85 870 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 POLR2DO15514 142 aaKnown RBP17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 ASAP2O43150 1006 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 IQCF3P0C7M6 154 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 RSPH10BP0C881 870 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 RFC2P35250 354 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 ZNF618Q5T7W0 954 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 MFSD5Q6N075 450 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 SV2BQ7L1I2 683 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 TMEM199Q8N511 208 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 FSIP1Q8NA03 581 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 LRRC15Q8TF66 581 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 DHX58Q96C10 678 aa17.25■□□□□ 0.35
PRPF38B-202ENST00000370022 SYKP43405 635 aa17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 MGAT3Q09327 533 aa17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 DRP2Q13474 957 aa17.24■□□□□ 0.35
PRPF38B-202ENST00000370022 MCM6Q14566 821 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms