RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 GRIN1Q05586 938 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 TYRO3Q06418 890 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 RAB30Q15771 203 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 STX1AQ16623 288 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 LONRF3Q496Y0 759 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 PCNX4Q63HM2 1172 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 FOXR2Q6PJQ5 311 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 SASS6Q6UVJ0 657 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 B3GNT9Q6UX72 402 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 TMCO2Q7Z6W1 182 aaPredicted RBP9.83□□□□□ -0.84
SNX27-201ENST00000368838 CNNM3Q8NE01 707 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 ETNPPLQ8TBG4 499 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 SYTL5Q8TDW5 730 aaPredicted RBP9.83□□□□□ -0.84
SNX27-201ENST00000368838 AFG1LQ8WV93 481 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 HAS1Q92839 578 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 RIT2Q99578 217 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 LRRC27Q9C0I9 530 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 MTIF3Q9H2K0 278 aaKnown RBP9.83□□□□□ -0.84
SNX27-201ENST00000368838 SLC28A3Q9HAS3 691 aa9.83□□□□□ -0.84
SNX27-201ENST00000368838 DDX25Q9UHL0 483 aaKnown RBP9.83□□□□□ -0.84
SNX27-201ENST00000368838 POLR2DO15514 142 aaKnown RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 TDP2O95551 362 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 CFBP00751 764 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 XRCC6P12956 609 aaKnown RBP eCLIP9.82□□□□□ -0.84
SNX27-201ENST00000368838 ATP2A2P16615 1042 aaKnown RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 EDNRBP24530 442 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 SPIRE1Q08AE8 756 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 KCNB1Q14721 858 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 POSTNQ15063 836 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 UBE2SQ16763 222 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 CEP55Q53EZ4 464 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 COBLL1Q53SF7 1204 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 NAALADL2Q58DX5 795 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 PPP2R2DQ66LE6 453 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 PDXDC2PQ6P474 469 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 USP49Q70CQ1 688 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 SPRED2Q7Z698 418 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 RPUSD2Q8IZ73 545 aaKnown RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 DNERQ8NFT8 737 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 EPSTI1Q96J88 318 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 RMDN3Q96TC7 470 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 MPHOSPH6Q99547 160 aaKnown RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 NAT10Q9H0A0 1025 aaKnown RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 NT5C3AQ9H0P0 336 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 DISC1Q9NRI5 854 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 PCDHA12Q9UN75 941 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 NOD1Q9Y239 953 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 MRVI1Q9Y6F6 885 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 KDM3AQ9Y4C1 1321 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 ATG2AQ2TAZ0 1938 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 IKBKBO14920 756 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 SLC37A4O43826 429 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 ARHGEF15O94989 841 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 SMC2O95347 1197 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 CA3P07451 260 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 SUPT20HL2P0C7V6 817 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 ZNF286BP0CG31 522 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 MYCLP12524 364 aaPredicted RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 ATP2B1P20020 1258 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 HOXA13P31271 388 aaPredicted RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 PPP1R2P41236 205 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 NLRP12P59046 1061 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 AMPD3Q01432 767 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 ARHGAP1Q07960 439 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 PPP2R5CQ13362 524 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 BRDTQ58F21 947 aaPredicted RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 ARHGEF16Q5VV41 709 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 HAUS3Q68CZ6 603 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 GDF6Q6KF10 455 aaPredicted RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 CCDC62Q6P9F0 684 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 PADI6Q6TGC4 694 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 CEP57L1Q8IYX8 460 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 MLKLQ8NB16 471 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 NEK9Q8TD19 979 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 SLC5A5Q92911 643 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 PDLIM2Q96JY6 352 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 IWS1Q96ST2 819 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 MMTAG2Q9BU76 263 aaKnown RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 RBSNQ9H1K0 784 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 TTC12Q9H892 705 aaPredicted RBP9.82□□□□□ -0.84
SNX27-201ENST00000368838 UBIAD1Q9Y5Z9 338 aa9.82□□□□□ -0.84
SNX27-201ENST00000368838 BDP1A6H8Y1 2624 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 A0A087X0B3 334 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 EPOPA6NHQ4 379 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 FAM86B1E9PN63 330 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 NKRFO15226 690 aaKnown RBP eCLIP9.81□□□□□ -0.84
SNX27-201ENST00000368838 PSMD10O75832 226 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 GH1P01241 217 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 MMP3P08254 477 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 FAM86B2P0C5J1 330 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 IQCF3P0C7M6 154 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 ERCC5P28715 1186 aaPredicted RBP9.81□□□□□ -0.84
SNX27-201ENST00000368838 DPYDQ12882 1025 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 MORC3Q14149 939 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 IQCB1Q15051 598 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 CAMK4Q16566 473 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 PTGISQ16647 500 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 TMEM119Q4V9L6 283 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 TJAP1Q5JTD0 557 aa9.81□□□□□ -0.84
SNX27-201ENST00000368838 NFRKBQ6P4R8 1299 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms