RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SLFN13Q68D06 897 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 KIAA0907Q7Z7F0 614 aaPredicted RBP9.89□□□□□ -0.83
TPM3-213ENST00000368545 PIBF1Q8WXW3 757 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 MRPS27Q92552 414 aaKnown RBP9.89□□□□□ -0.83
TPM3-213ENST00000368545 CLMNQ96JQ2 1002 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 ASB2Q96Q27 587 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 ZMYND12Q9H0C1 365 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.89□□□□□ -0.83
TPM3-213ENST00000368545 ZBTB21Q9ULJ3 1066 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 PCDHA7Q9UN72 937 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 SYCE3A1L190 88 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 SPATA31C2B4DYI2 1134 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 ASNSP08243 561 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 EDN3P14138 238 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 CAP2P40123 477 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 PTPAQ15257 358 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 DCAF15Q66K64 600 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 HOMER1Q86YM7 354 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 CCAR1Q8IX12 1150 aaKnown RBP9.89□□□□□ -0.83
TPM3-213ENST00000368545 NUP62CLQ9H1M0 184 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 C6orf50Q9HD87 102 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 ZMYND8Q9ULU4 1186 aaPredicted RBP9.89□□□□□ -0.83
TPM3-213ENST00000368545 KCNH4Q9UQ05 1017 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 ALPK3Q96L96 1907 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 CUL9Q8IWT3 2517 aa9.89□□□□□ -0.83
TPM3-213ENST00000368545 TRIM75PA6NK02 468 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 CUTAO60888 179 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 LIG1P18858 919 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 MRE11P49959 708 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 TOB1P50616 345 aaPredicted RBP9.88□□□□□ -0.83
TPM3-213ENST00000368545 PPATQ06203 517 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 POU4F2Q12837 409 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 SHROOM1Q2M3G4 852 aaPredicted RBP9.88□□□□□ -0.83
TPM3-213ENST00000368545 TMEM31Q5JXX7 168 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 SIAH1Q8IUQ4 282 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 SLITRK4Q8IW52 837 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 ADGRF4Q8IZF3 695 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 MTMR8Q96EF0 704 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 CEP63Q96MT8 703 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 TEPSINQ96N21 525 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 PIGSQ96S52 555 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 UHRF1Q96T88 793 aaPredicted RBP9.88□□□□□ -0.83
TPM3-213ENST00000368545 UBA5Q9GZZ9 404 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 DACT1Q9NYF0 836 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 G3BP2Q9UN86 482 aaKnown RBP9.88□□□□□ -0.83
TPM3-213ENST00000368545 F5H6K3 240 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 ZBTB5O15062 677 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 LMNB2Q03252 620 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 KLRC3Q07444 240 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 PRKG1Q13976 671 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 RRP1BQ14684 758 aaKnown RBP9.88□□□□□ -0.83
TPM3-213ENST00000368545 DDR2Q16832 855 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 SEZ6Q53EL9 994 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 PRAMEF18Q5VWM3 479 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 FAM43AQ8N2R8 423 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 FSIP1Q8NA03 581 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 DEFB118Q96PH6 123 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 TCF12Q99081 682 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 CPVLQ9H3G5 476 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 JMJD4Q9H9V9 463 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 LIN7BQ9HAP6 207 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 OGDHLQ9ULD0 1010 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 TMX2Q9Y320 296 aa9.88□□□□□ -0.83
TPM3-213ENST00000368545 CCDC194A0A1B0GVG4 234 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 CTAGE5O15320 804 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 NDUFB10O96000 172 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 CMA1P23946 247 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 JAG1P78504 1218 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 SQSTM1Q13501 440 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 KCTD1Q719H9 257 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 MIGA2Q7L4E1 593 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 KRT25Q7Z3Z0 450 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 CDAN1Q8IWY9 1227 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 COA7Q96BR5 231 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 GLT8D2Q9H1C3 349 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 TNMDQ9H2S6 317 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 CLSTN2Q9H4D0 955 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 VAT1LQ9HCJ6 419 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 PCDHB6Q9Y5E3 794 aa9.87□□□□□ -0.83
TPM3-213ENST00000368545 SMCO2A6NFE2 343 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 KINO60870 393 aaKnown RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 HMGCRP04035 888 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 BMP3P12645 472 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 TFE3P19532 575 aaPredicted RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 MARCKSP29966 332 aaPredicted RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 CAP1Q01518 475 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 TTC38Q5R3I4 469 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 AXDND1Q5T1B0 1012 aaPredicted RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 BTNL9Q6UXG8 535 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 PIK3AP1Q6ZUJ8 805 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 MEIOBQ8N635 442 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 ENGASEQ8NFI3 743 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 TMEM260Q9NX78 707 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 A0A1W2PRG0 241 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 PHF20L1A8MW92 1017 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 BTBD19C9JJ37 291 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 CTNND1O60716 968 aaKnown RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 CTSOP43234 321 aaPredicted RBP9.86□□□□□ -0.83
TPM3-213ENST00000368545 ADCY7P51828 1080 aa9.86□□□□□ -0.83
TPM3-213ENST00000368545 STAT2P52630 851 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms