RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 KRT13P13646 458 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 RPS12P25398 132 aaKnown RBP11.16□□□□□ -0.62
TPM3-209ENST00000368527 JAM2P57087 298 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 CYP4A11Q02928 519 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 PAK2Q13177 524 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 RPS6KA1Q15418 735 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 TCERG1LQ5VWI1 586 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 SMYD5Q6GMV2 418 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 ALKBH5Q6P6C2 394 aaKnown RBP11.16□□□□□ -0.62
TPM3-209ENST00000368527 LEKR1Q6ZMV7 388 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 INTS8Q75QN2 995 aaKnown RBP11.16□□□□□ -0.62
TPM3-209ENST00000368527 FAM133AQ8N9E0 248 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 AENQ8WTP8 325 aaKnown RBP11.16□□□□□ -0.62
TPM3-209ENST00000368527 GJA10Q969M2 543 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 ZBED3Q96IU2 234 aaPredicted RBP11.16□□□□□ -0.62
TPM3-209ENST00000368527 DRC1Q96MC2 740 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 WDR18Q9BV38 432 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 KIAA1683Q9H0B3 1180 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 GCNT4Q9P109 453 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 PCDHAC2Q9Y5I4 1007 aa11.16□□□□□ -0.62
TPM3-209ENST00000368527 A0A087X0T9 212 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 CCDC188H7C350 402 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 PDE2AO00408 941 aaPredicted RBP11.15□□□□□ -0.62
TPM3-209ENST00000368527 MAFGO15525 162 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 C21orf2O43822 256 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 PALMO75781 387 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 FAM228BP0C875 321 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 SFNP31947 248 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 HOXD13P35453 343 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 CASP5P51878 434 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 JAK3P52333 1124 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 MCCD1P59942 119 aaPredicted RBP11.15□□□□□ -0.62
TPM3-209ENST00000368527 RAD51AP2Q09MP3 1159 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 PPFIA1Q13136 1202 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 DCAF17Q5H9S7 520 aaPredicted RBP11.15□□□□□ -0.62
TPM3-209ENST00000368527 ODR4Q5SWX8 454 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 MIER3Q7Z3K6 550 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 USP37Q86T82 979 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 SPICE1Q8N0Z3 855 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 C1orf131Q8NDD1 294 aaKnown RBP11.15□□□□□ -0.62
TPM3-209ENST00000368527 ACTRT1Q8TDG2 376 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 ACER1Q8TDN7 264 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 WHAMMQ8TF30 809 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 FAM81BQ96LP2 452 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 ACCSQ96QU6 501 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 NAP1L3Q99457 506 aaPredicted RBP11.15□□□□□ -0.62
TPM3-209ENST00000368527 FGFBP2Q9BYJ0 223 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 RGL1Q9NZL6 768 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 SUCLA2Q9P2R7 463 aaPredicted RBP11.15□□□□□ -0.62
TPM3-209ENST00000368527 ADAMTS1Q9UHI8 967 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 NAGPAQ9UK23 515 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 CCPG1Q9ULG6 757 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 HPCAL4Q9UM19 191 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 NENFQ9UMX5 172 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 EXOC7Q9UPT5 735 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 USP20Q9Y2K6 914 aa11.15□□□□□ -0.62
TPM3-209ENST00000368527 CTDP1Q9Y5B0 961 aaPredicted RBP11.15□□□□□ -0.62
TPM3-209ENST00000368527 PFASO15067 1338 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 GOLGA6BA6NDN3 693 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 H3BQF6 201 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 NKRFO15226 690 aaKnown RBP eCLIP11.14□□□□□ -0.63
TPM3-209ENST00000368527 TGFB1I1O43294 461 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 CTNND1O60716 968 aaKnown RBP11.14□□□□□ -0.63
TPM3-209ENST00000368527 ZBED4O75132 1171 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 SOX5P35711 763 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 ECE1P42892 770 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 FMO5P49326 533 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 SNAP25P60880 206 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 JAG1P78504 1218 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 PTK2Q05397 1052 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 CUL1Q13616 776 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 CTTNQ14247 550 aaKnown RBP11.14□□□□□ -0.63
TPM3-209ENST00000368527 RRP1BQ14684 758 aaKnown RBP11.14□□□□□ -0.63
TPM3-209ENST00000368527 TCEAL1Q15170 157 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 DPY19L2P1Q6NXN4 242 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 NFRKBQ6P4R8 1299 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 CCDC174Q6PII3 467 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 SYCP3Q8IZU3 236 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 MREGQ8N565 214 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 MORC4Q8TE76 937 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 CCDC43Q96MW1 224 aaKnown RBP11.14□□□□□ -0.63
TPM3-209ENST00000368527 RUFY1Q96T51 708 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 LXNQ9BS40 222 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 STRA6Q9BX79 667 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 UNC45AQ9H3U1 944 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 C17orf75Q9HAS0 396 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 AGPAT3Q9NRZ7 376 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 ANKEF1Q9NU02 776 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 VPS18Q9P253 973 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
TPM3-209ENST00000368527 UBIAD1Q9Y5Z9 338 aa11.14□□□□□ -0.63
TPM3-209ENST00000368527 NCANO14594 1321 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 CLRN2A0PK11 232 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 H0YCG3 227 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 ZNF185O15231 689 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 HSF2BPO75031 334 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 PPP1R37O75864 691 aa11.13□□□□□ -0.63
TPM3-209ENST00000368527 KIF4AO95239 1232 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms