RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
SHC1-203ENST00000368449 NT5DC3Q86UY8 548 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 KSR1Q8IVT5 923 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 LNX1Q8TBB1 728 aaPredicted RBP13.69□□□□□ -0.22
SHC1-203ENST00000368449 ZNF622Q969S3 477 aaKnown RBP eCLIP13.69□□□□□ -0.22
SHC1-203ENST00000368449 NGLY1Q96IV0 654 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 ZBTB39O15060 712 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 H2AFZP0C0S5 128 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 TMOD1P28289 359 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 IFT88Q13099 833 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 VPS72Q15906 364 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 USH1GQ495M9 461 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 H2AFVQ71UI9 128 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 RPAINQ86UA6 219 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 CCDC13Q8IYE1 715 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 SLFN12Q8IYM2 578 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
SHC1-203ENST00000368449 PPANQ9NQ55 473 aaKnown RBP13.69□□□□□ -0.22
SHC1-203ENST00000368449 CNOT8Q9UFF9 292 aaKnown RBP13.69□□□□□ -0.22
SHC1-203ENST00000368449 BZW2Q9Y6E2 419 aaKnown RBP13.69□□□□□ -0.22
SHC1-203ENST00000368449 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 A6NNZ2 444 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 FLOT1O75955 427 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 GCNT3O95395 438 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 CTNNA1P35221 906 aaKnown RBP13.69□□□□□ -0.22
SHC1-203ENST00000368449 COPB2P35606 906 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 GALCP54803 685 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 TCP10Q12799 353 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 CUL1Q13616 776 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 TUBB8Q3ZCM7 444 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 DAAM2Q86T65 1068 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 MIEF2Q96C03 454 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 BORCS6Q96GS4 357 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 SLC12A6Q9UHW9 1150 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 ATXN2Q99700 1313 aaKnown RBP13.69□□□□□ -0.22
SHC1-203ENST00000368449 IGSF9BQ9UPX0 1349 aa13.69□□□□□ -0.22
SHC1-203ENST00000368449 MYO3BQ8WXR4 1341 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 E7EVH7 732 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 MSH4O15457 936 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 HOXA13P31271 388 aaPredicted RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 COG2Q14746 738 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 PREPLQ4J6C6 727 aaPredicted RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 ZC2HC1CQ53FD0 456 aaPredicted RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 SLFN13Q68D06 897 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 PIGOQ8TEQ8 1089 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 TYW1Q9NV66 732 aaKnown RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 PPP1R9AQ9ULJ8 1098 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 LTBP4Q8N2S1 1624 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 UBAP1LF5GYI3 381 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 GCOM1H8Y6P7 765 aaPredicted RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 BUB1BO60566 1050 aaPredicted RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 MYZAPP0CAP1 466 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 NMT1P30419 496 aaKnown RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 DCAF12L1Q5VU92 463 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 GLYCTKQ8IVS8 523 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 RASGEF1CQ8N431 466 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 UBLCP1Q8WVY7 318 aaPredicted RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 NAP1L4Q99733 375 aaKnown RBP13.68□□□□□ -0.22
SHC1-203ENST00000368449 TRIM51Q9BSJ1 452 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 DPH5Q9H2P9 285 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 VCPKMTQ9H867 229 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 KCNQ5Q9NR82 932 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 BCCIPQ9P287 314 aaKnown RBP eCLIP13.68□□□□□ -0.22
SHC1-203ENST00000368449 VAV3Q9UKW4 847 aa13.68□□□□□ -0.22
SHC1-203ENST00000368449 SMCHD1A6NHR9 2005 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 ZMYM2Q9UBW7 1377 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 OPLAHO14841 1288 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 CALUO43852 315 aaPredicted RBP13.67□□□□□ -0.22
SHC1-203ENST00000368449 EVI5O60447 810 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 RASSF9O75901 435 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 HOXA10P31260 410 aaPredicted RBP13.67□□□□□ -0.22
SHC1-203ENST00000368449 POU5F1Q01860 360 aaKnown RBP13.67□□□□□ -0.22
SHC1-203ENST00000368449 LRIG3Q6UXM1 1119 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 ADAT2Q7Z6V5 191 aaKnown RBP13.67□□□□□ -0.22
SHC1-203ENST00000368449 CEP57Q86XR8 500 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 SLC30A5Q8TAD4 765 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 HES6Q96HZ4 224 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 TRIM31Q9BZY9 425 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 SUCLA2Q9P2R7 463 aaPredicted RBP13.67□□□□□ -0.22
SHC1-203ENST00000368449 ODF2LQ9ULJ1 636 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 DDTLA6NHG4 134 aaPredicted RBP13.67□□□□□ -0.22
SHC1-203ENST00000368449 FAM107AO95990 144 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 NF2P35240 595 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 SMTNP53814 917 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 QPCTQ16769 361 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 PALB2Q86YC2 1186 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 EIF1ADQ8N9N8 165 aaKnown RBP13.67□□□□□ -0.22
SHC1-203ENST00000368449 SLC40A1Q9NP59 571 aa13.67□□□□□ -0.22
SHC1-203ENST00000368449 GREB1LQ9C091 1923 aaPredicted RBP13.67□□□□□ -0.22
SHC1-203ENST00000368449 ABCB4P21439 1286 aa13.66□□□□□ -0.22
SHC1-203ENST00000368449 CTTNQ14247 550 aaKnown RBP13.66□□□□□ -0.22
SHC1-203ENST00000368449 PPP2R5AQ15172 486 aa13.66□□□□□ -0.22
SHC1-203ENST00000368449 IFI16Q16666 785 aaKnown RBP13.66□□□□□ -0.22
SHC1-203ENST00000368449 SPRED3Q2MJR0 410 aa13.66□□□□□ -0.22
SHC1-203ENST00000368449 Q4G0T1 1027 aa13.66□□□□□ -0.22
SHC1-203ENST00000368449 TMC3Q7Z5M5 1100 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms