RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 EMILIN2Q9BXX0 1053 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 BICC1Q9H694 974 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 HELLSQ9NRZ9 838 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 DDX19AQ9NUU7 478 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 MTMR6Q9Y217 621 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 MYH15Q9Y2K3 1946 aa7.46□□□□□ -1.22
ECHDC1-202ENST00000368289 ITPR1Q14643 2758 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 DYNC1I1O14576 645 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 SLC27A2O14975 620 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 PTMAP06454 111 aaKnown RBP7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 ZFYP08048 801 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 COL8A1P27658 744 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 IL15P40933 162 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 VCPP55072 806 aaKnown RBP7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 ZP2Q05996 745 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 TCP10Q12799 353 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 GRB10Q13322 594 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 HSP90AA2PQ14568 343 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 LEXMQ3ZCV2 418 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 MCMDC2Q4G0Z9 681 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 ANKRD33Q7Z3H0 272 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 BMP8AQ7Z5Y6 402 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 GPR142Q7Z601 462 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 GALNT11Q8NCW6 608 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 LENG1Q96BZ8 264 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 KAZALD1Q96I82 304 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 APBA2Q99767 749 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 MYD88Q99836 296 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 HAUS7Q99871 368 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 DSCC1Q9BVC3 393 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 ANKRD2Q9GZV1 360 aa7.45□□□□□ -1.22
ECHDC1-202ENST00000368289 GOLGA6L4A6NEF3 574 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 CYSRT1A8MQ03 144 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 RBAK-RBAKDNI3L0D1 243 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 IGKV5-2P06315 115 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 CTSHP09668 335 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 CNGA1P29973 690 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 RGS2P41220 211 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 PTH1RQ03431 593 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 NMIQ13287 307 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 RRP1BQ14684 758 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 ACAP1Q15027 740 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 POU4F3Q15319 338 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 GRIK4Q16099 956 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 ME3Q16798 604 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 DUOXA2Q1HG44 320 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 TNNI3KQ59H18 835 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 FAM47AQ5JRC9 791 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 PRAMEF19Q5SWL8 479 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 SASS6Q6UVJ0 657 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 RBM43Q6ZSC3 357 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 CCDC191Q8NCU4 936 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 FAM84BQ96KN1 310 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 NEK1Q96PY6 1258 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 CORO1BQ9BR76 489 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 FUCA2Q9BTY2 467 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 NOC4LQ9BVI4 516 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 IL25Q9H293 177 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 UBE2ZQ9H832 354 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 CTNNA3Q9UI47 895 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 MUTYHQ9UIF7 546 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 FPGT-TNNI3KV9GXZ4 949 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 KMT2EQ8IZD2 1858 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 WDR19Q8NEZ3 1342 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 USP9XQ93008 2570 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 DMXL2Q8TDJ6 3036 aa7.44□□□□□ -1.22
ECHDC1-202ENST00000368289 KBTBD13C9JR72 458 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 H0Y858 1186 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 DHX16O60231 1041 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 MSCO60682 206 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 CNMDO75829 334 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 CA3P07451 260 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 HOXC6P09630 235 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 SLC5A1P13866 664 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 HSP90B1P14625 803 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 NME2P22392 152 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 GYG1P46976 350 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 RFX5P48382 616 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 NLRP12P59046 1061 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 HDLBPQ00341 1268 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 LRRC14Q15048 493 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 CWF19L2Q2TBE0 894 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 FOXD4L6Q3SYB3 417 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 NAA16Q6N069 864 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 FOXD4L3Q6VB84 417 aaPredicted RBP7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 ZNF804AQ7Z570 1209 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 CCDC83Q8IWF9 413 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 TMEM130Q8N3G9 435 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 KBTBD3Q8NAB2 608 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 ARRDC4Q8NCT1 418 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 PIBF1Q8WXW3 757 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 HOOK2Q96ED9 719 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 EDC3Q96F86 508 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 AGXT2Q9BYV1 514 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 TLR9Q9NR96 1032 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 CNPY2Q9Y2B0 182 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 MYO7AQ13402 2215 aa7.43□□□□□ -1.22
ECHDC1-202ENST00000368289 LOC285556D6RIA3 1793 aa7.42□□□□□ -1.22
ECHDC1-202ENST00000368289 NEMFO60524 1076 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms