RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 USP30Q70CQ3 517 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 OTOP3Q7RTS5 596 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 HOMER1Q86YM7 354 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 SYNPOQ8N3V7 929 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 GPR150Q8NGU9 434 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 UHMK1Q8TAS1 419 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 APPBP2Q92624 585 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 KIAA1683Q9H0B3 1180 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 RIOX1Q9H6W3 641 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 SLC39A2Q9NP94 309 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 CD2APQ9Y5K6 639 aa5.04□□□□□ -1.6
ECHDC1-201ENST00000368287 LMNAP02545 664 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 C6orf222P0C671 652 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 C21orf58P58505 322 aa5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 C16orf86Q6ZW13 317 aa5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 KIAA0907Q7Z7F0 614 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 MTDHQ86UE4 582 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 PRIMA1Q86XR5 153 aa5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 TMEM176AQ96HP8 235 aa5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 MAGEB10Q96LZ2 347 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 CLUHP3Q96NS8 147 aa5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 MRPL4Q9BYD3 311 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 PDGFDQ9GZP0 370 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 NRDE2Q9H7Z3 1164 aa5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 GPRC5BQ9NZH0 403 aa5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 HECAQ9UBI9 543 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 PPARGC1AQ9UBK2 798 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 NDOR1Q9UHB4 597 aa5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 ZNHIT2Q9UHR6 403 aa5.03□□□□□ -1.6
ECHDC1-201ENST00000368287 FAM47E-STBD1D6RA91 191 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 PLD2O14939 933 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 GSTA4O15217 222 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 MSCO60682 206 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 RAPGEF3O95398 923 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 PROZP22891 400 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 KCNQ1P51787 676 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 SLC25A3Q00325 362 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 GUCY1A3Q02108 690 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 PAK1Q13153 545 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 TCEA2Q15560 299 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 SYCE2Q6PIF2 218 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 GPR135Q8IZ08 494 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 ZDHHC5Q9C0B5 715 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 SFMBT1Q9UHJ3 866 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 TRAF6Q9Y4K3 522 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 TELO2Q9Y4R8 837 aa5.02□□□□□ -1.61
ECHDC1-201ENST00000368287 ASXL2Q76L83 1435 aa5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 CLSTN1O94985 981 aa5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 SOD2P04179 222 aa5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 GNAT1P11488 350 aa5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 COL6A2P12110 1019 aa5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 ITGB6P18564 788 aa5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 PTGS2P35354 604 aa5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 SPIRE1Q08AE8 756 aa5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 PCOLCEQ15113 449 aa5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 SPTY2D1Q68D10 685 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 LARP4Q71RC2 724 aaKnown RBP eCLIP5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 NCOA5Q9HCD5 579 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-201ENST00000368287 GRK2P25098 689 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 GRK3P35626 688 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 ADCY8P40145 1251 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 GYS2P54840 703 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 ST5P78524 1137 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 FNDC3BQ53EP0 1204 aaKnown RBP5□□□□□ -1.61
ECHDC1-201ENST00000368287 DALRD3Q5D0E6 543 aaKnown RBP5□□□□□ -1.61
ECHDC1-201ENST00000368287 TAF7LQ5H9L4 462 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 MBNL2Q5VZF2 373 aaKnown RBP5□□□□□ -1.61
ECHDC1-201ENST00000368287 EP400NLQ6ZTU2 488 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 ZC3H7AQ8IWR0 971 aaKnown RBP5□□□□□ -1.61
ECHDC1-201ENST00000368287 SLC7A14Q8TBB6 771 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 NTN5Q8WTR8 489 aaPredicted RBP5□□□□□ -1.61
ECHDC1-201ENST00000368287 KCNJ15Q99712 375 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 SLC52A2Q9HAB3 445 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 FBXO10Q9UK96 956 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 DSEQ9UL01 958 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 PCDHA9Q9Y5H5 950 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 PCDHA8Q9Y5H6 950 aa5□□□□□ -1.61
ECHDC1-201ENST00000368287 A0A0A6YYK5 440 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 ACOT7O00154 380 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 KCNQ2O43526 872 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 CRTAMO95727 393 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 SDSP20132 328 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 MEOX1P50221 254 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 PABPC4Q13310 644 aaKnown RBP eCLIP4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 CNGB1Q14028 1251 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 TRIM61Q5EBN2 209 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 FAM47CQ5HY64 1035 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 KCTD1Q719H9 257 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 FGD2Q7Z6J4 655 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 SHCBP1Q8NEM2 672 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 OR14K1Q8NGZ2 314 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 HAS1Q92839 578 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 FBXW5Q969U6 566 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 FEZ1Q99689 392 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 OR10A2Q9H208 303 aa4.99□□□□□ -1.61
ECHDC1-201ENST00000368287 CATSPERZQ9NTU4 200 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms