RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 CTSHP09668 335 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 RSPH10BP0C881 870 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 SPATA31C1P0DKV0 1188 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 ACRP10323 421 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 RPA1P27694 616 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 MARCKSP29966 332 aaPredicted RBP11.04□□□□□ -0.64
NUP43-202ENST00000367402 CDC25AP30304 524 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 CCT6AP40227 531 aaKnown RBP11.04□□□□□ -0.64
NUP43-202ENST00000367402 NPEPPSP55786 919 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 TBC1D8BQ0IIM8 1120 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 PPIGQ13427 754 aaKnown RBP eCLIP11.04□□□□□ -0.642e-6■■■□□ 17.2
NUP43-202ENST00000367402 ZRSR1Q15695 479 aaKnown RBP11.04□□□□□ -0.64
NUP43-202ENST00000367402 HAUS3Q68CZ6 603 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 DEFB128Q7Z7B8 93 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 NME8Q8N427 588 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 IGSF22Q8N9C0 903 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 SNX29Q8TEQ0 813 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 CCDC43Q96MW1 224 aaKnown RBP11.04□□□□□ -0.64
NUP43-202ENST00000367402 USP28Q96RU2 1077 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 POLR3CQ9BUI4 534 aaPredicted RBP11.04□□□□□ -0.64
NUP43-202ENST00000367402 SUGCTQ9HAC7 445 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 TUFT1Q9NNX1 390 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 CYP26B1Q9NR63 512 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 TFIP11Q9UBB9 837 aaKnown RBP11.04□□□□□ -0.64
NUP43-202ENST00000367402 HCSTQ9UBK5 93 aa11.04□□□□□ -0.64
NUP43-202ENST00000367402 ALPK3Q96L96 1907 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 SMIM35A0A1B0GVV1 85 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 M0QZ92 97 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 CAND2O75155 1236 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 LYPLA2O95372 231 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 BRD1O95696 1058 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 RPLP2P05387 115 aaKnown RBP11.03□□□□□ -0.64
NUP43-202ENST00000367402 TMOD1P28289 359 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 EPHB4P54760 987 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 RBL2Q08999 1139 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 TMEM62Q0P6H9 643 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 STK38Q15208 465 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 PTPAQ15257 358 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 TARBP2Q15633 366 aaKnown RBP11.03□□□□□ -0.64
NUP43-202ENST00000367402 XKR9Q5GH70 373 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 IER5Q5VY09 327 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 EFCAB12Q6NXP0 572 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 RPUSD2Q8IZ73 545 aaKnown RBP11.03□□□□□ -0.64
NUP43-202ENST00000367402 KIAA0319LQ8IZA0 1049 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 LRRC71Q8N4P6 559 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 PIGOQ8TEQ8 1089 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 NACC1Q96RE7 527 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 IL23AQ9NPF7 189 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 ZDHHC9Q9Y397 364 aa11.03□□□□□ -0.64
NUP43-202ENST00000367402 MAFO75444 373 aaPredicted RBP11.02□□□□□ -0.65
NUP43-202ENST00000367402 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
NUP43-202ENST00000367402 FGBP02675 491 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 CHRNA1P02708 482 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 XRCC6P12956 609 aaKnown RBP eCLIP11.02□□□□□ -0.65
NUP43-202ENST00000367402 BMP8BP34820 402 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 RFC2P35250 354 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 LONP1P36776 959 aaKnown RBP11.02□□□□□ -0.65
NUP43-202ENST00000367402 UBA7P41226 1012 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 DNM2P50570 870 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 CLCN3P51790 818 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 POLGP54098 1239 aaPredicted RBP11.02□□□□□ -0.65
NUP43-202ENST00000367402 MRPS6P82932 125 aaKnown RBP11.02□□□□□ -0.65
NUP43-202ENST00000367402 SLC39A14Q15043 492 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 TRAF7Q6Q0C0 670 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 C16orf59Q7L2K0 433 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 RPAINQ86UA6 219 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 EXOC8Q8IYI6 725 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 SLC7A3Q8WY07 619 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 CDK5RAP3Q96JB5 506 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 CEP89Q96ST8 783 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 MAP7D2Q96T17 732 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 PLIN2Q99541 437 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 ANKEF1Q9NU02 776 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 DDX19AQ9NUU7 478 aaKnown RBP11.02□□□□□ -0.65
NUP43-202ENST00000367402 KIAA1024Q9UPX6 916 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 AKT3Q9Y243 479 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 GINS2Q9Y248 185 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 PPME1Q9Y570 386 aa11.02□□□□□ -0.65
NUP43-202ENST00000367402 SPTLC2O15270 562 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 NBNO60934 754 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 VTNP04004 478 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 PFKMP08237 780 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
NUP43-202ENST00000367402 MUTP22033 750 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 RFC5P40937 340 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 NASPP49321 788 aaPredicted RBP11.01□□□□□ -0.65
NUP43-202ENST00000367402 RARRES1P49788 294 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 NUCB2P80303 420 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 DNM1Q05193 864 aaKnown RBP11.01□□□□□ -0.65
NUP43-202ENST00000367402 GRIN1Q05586 938 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 SHHQ15465 462 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 ECM1Q16610 540 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 FAM26DQ5JW98 314 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 SPECC1Q5M775 1068 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 ATL3Q6DD88 541 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 PSRC1Q6PGN9 363 aaPredicted RBP11.01□□□□□ -0.65
NUP43-202ENST00000367402 ZNF365Q70YC5 407 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 CABP7Q86V35 215 aa11.01□□□□□ -0.65
NUP43-202ENST00000367402 KRI1Q8N9T8 703 aaKnown RBP11.01□□□□□ -0.65
NUP43-202ENST00000367402 LINC00301Q8NCQ3 95 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms