RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 HINFPQ9BQA5 517 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 MTIF3Q9H2K0 278 aaKnown RBP16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 SP110Q9HB58 689 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 PCDHA13Q9Y5I0 950 aa16.81■□□□□ 0.28
NUCKS1-201ENST00000367142 KPNA7A9QM74 516 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 MYO1DO94832 1006 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 CALB1P05937 261 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 EEF1DP29692 281 aaKnown RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 TMEM35BQ8NCS4 154 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 NEK9Q8TD19 979 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 PCDHA6Q9UN73 950 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 PCDHA8Q9Y5H6 950 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 ABCB11O95342 1321 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 ZBED6P86452 979 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 KIF23Q02241 960 aaPredicted RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 EFHBQ8N7U6 833 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 CALR3Q96L12 384 aaKnown RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 RAVER2Q9HCJ3 691 aaKnown RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 CRLF3Q8IUI8 442 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 TTC8Q8TAM2 541 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 DDX50Q9BQ39 737 aaKnown RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 FGFR1OP2Q9NVK5 253 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 TLR7Q9NYK1 1049 aaKnown RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 ARL4CP56559 192 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 GCOM2Q9BZD3 368 aaPredicted RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 PDE11AQ9HCR9 933 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 MAP3K20Q9NYL2 800 aaKnown RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 CTTNBP2Q8WZ74 1663 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 PER1O15534 1290 aaPredicted RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 KRT76Q01546 638 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 ANKS3Q6ZW76 656 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 TEX2Q8IWB9 1127 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 ENOX1Q8TC92 643 aaKnown RBP16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 SEPT8Q92599 483 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 TRIM62Q9BVG3 475 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 BHMT2Q9H2M3 363 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 GDAQ9Y2T3 454 aa16.8■□□□□ 0.28
NUCKS1-201ENST00000367142 KCNA1Q09470 495 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 ARHGEF25Q86VW2 580 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 NSUN7Q8NE18 718 aaKnown RBP16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 COG4Q9H9E3 785 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 PALLDQ8WX93 1383 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 SFMBT1Q9UHJ3 866 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 PTPRTO14522 1441 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 RALAP11233 206 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 CPB1P15086 417 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 WASHC5Q12768 1159 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 STX18Q9P2W9 335 aaKnown RBP16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 ZBTB17Q13105 803 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 LLGL1Q15334 1064 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 TTC39CQ8N584 583 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 MTBPQ96DY7 904 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 ADAM22Q9P0K1 906 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 RNF181Q9P0P0 153 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 UBE4BO95155 1302 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 SLCO1A2P46721 670 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 EIF3BP55884 814 aaKnown RBP16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 TRPV6Q9H1D0 765 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 MAPKBP1O60336 1514 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 KDM5DQ9BY66 1539 aa16.79■□□□□ 0.28
NUCKS1-201ENST00000367142 WDR91A4D1P6 747 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 ECE2O60344 883 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 LIG3P49916 1009 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 ARL6IP4Q66PJ3 421 aaKnown RBP16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 ZMYND12Q9H0C1 365 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 FAM96AQ9H5X1 160 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 CYP26B1Q9NR63 512 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 SRPRBQ9Y5M8 271 aaKnown RBP16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 E2F6O75461 281 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 IFNAR1P17181 557 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 GNL1P36915 607 aaPredicted RBP16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 ACAD11Q709F0 780 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 SLC26A7Q8TE54 656 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 CENPKQ9BS16 269 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 TRIM54Q9BYV2 358 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 LTKP29376 864 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 TBC1D19Q8N5T2 526 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 ARHGEF1Q92888 912 aaKnown RBP16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 NDST4Q9H3R1 872 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 CHCHD3Q9NX63 227 aaKnown RBP16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 COPEO14579 308 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 SFNP31947 248 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 ZC3H12BQ5HYM0 836 aaKnown RBP16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 TADA2BQ86TJ2 420 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 BANK1Q8NDB2 785 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 EGFL8Q99944 293 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 STAP2Q9UGK3 403 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 CYP21A2P08686 494 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 ESRRAP11474 423 aaPredicted RBP16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 FCER1AP12319 257 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 ITPRIPL1Q6GPH6 555 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 MB21D1Q8N884 522 aa16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 SRPK1Q96SB4 655 aaKnown RBP16.78■□□□□ 0.28
NUCKS1-201ENST00000367142 SARS2Q9NP81 518 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms