RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 MPOP05164 745 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 NF2P35240 595 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 PMS1P54277 932 aaKnown RBP9.45□□□□□ -0.9
H3F3A-201ENST00000366813 FXNQ16595 210 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 LRIT3Q3SXY7 679 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 TMEM151BQ8IW70 566 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 CCDC144CPQ8IYA2 1237 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 PTPN18Q99952 460 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 GDF15Q99988 308 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 PLCD4Q9BRC7 762 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 KRTAP4-9Q9BYQ8 210 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 MYOZ2Q9NPC6 264 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 DUOX1Q9NRD9 1551 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 FADS2P1A8MWK0 482 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 SNRPA1P09661 255 aaKnown RBP9.44□□□□□ -0.9
H3F3A-201ENST00000366813 VIPR1P32241 457 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 BMP8BP34820 402 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 CTSWP56202 376 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 LAPTM5Q13571 262 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 DDR2Q16832 855 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 TTLL7Q6ZT98 887 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 MICAL1Q8TDZ2 1067 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 WNK4Q96J92 1243 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 CLMNQ96JQ2 1002 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 SIGLEC10Q96LC7 697 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 ARHGAP39Q9C0H5 1083 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 SIRPGQ9P1W8 387 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 MBD1Q9UIS9 605 aaPredicted RBP9.44□□□□□ -0.9
H3F3A-201ENST00000366813 PCDHB10Q9UN67 800 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 GPR55Q9Y2T6 319 aaPredicted RBP9.44□□□□□ -0.9
H3F3A-201ENST00000366813 IRS2Q9Y4H2 1338 aa9.44□□□□□ -0.9
H3F3A-201ENST00000366813 KDM3BQ7LBC6 1761 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 A0A1W2PQ27 194 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 A0A1W2PQ64 194 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 A0A1W2PQC6 194 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 A0A1W2PQD8 194 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 VAV1P15498 845 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 SSPNQ14714 243 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 ARHGEF6Q15052 776 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 HSF5Q4G112 596 aaPredicted RBP9.43□□□□□ -0.9
H3F3A-201ENST00000366813 CWF19L1Q69YN2 538 aaKnown RBP9.43□□□□□ -0.9
H3F3A-201ENST00000366813 OTUD7BQ6GQQ9 843 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 VHLLQ6RSH7 139 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 DPH6Q7L8W6 267 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 PPFIBP1Q86W92 1011 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 POLLQ9UGP5 575 aa9.43□□□□□ -0.9
H3F3A-201ENST00000366813 LAMA2P24043 3122 aaKnown RBP9.42□□□□□ -0.9
H3F3A-201ENST00000366813 ERVV-1B6SEH8 477 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 C9IYK1 514 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 U2SURPO15042 1029 aaKnown RBP9.42□□□□□ -0.9
H3F3A-201ENST00000366813 GJB1P08034 283 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 ZBTB48P10074 688 aaPredicted RBP9.42□□□□□ -0.9
H3F3A-201ENST00000366813 PRKCAP17252 672 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 CYP4F8P98187 520 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 MAP3K12Q12852 859 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 GRAPQ13588 217 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 SLC10A5Q5PT55 438 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 C6orf15Q6UXA7 325 aaPredicted RBP9.42□□□□□ -0.9
H3F3A-201ENST00000366813 FAM178BQ8IXR5 827 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 C7orf61Q8IZ16 206 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 ZNF34Q8IZ26 560 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 GRAPLQ8TC17 118 aaPredicted RBP9.42□□□□□ -0.9
H3F3A-201ENST00000366813 KLHL6Q8WZ60 621 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 OSBPL2Q9H1P3 480 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 PARD6AQ9NPB6 346 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 ST7Q9NRC1 585 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 ZMYND8Q9ULU4 1186 aaPredicted RBP9.42□□□□□ -0.9
H3F3A-201ENST00000366813 MAP3K15Q6ZN16 1313 aa9.42□□□□□ -0.9
H3F3A-201ENST00000366813 IBTKQ9P2D0 1353 aaPredicted RBP9.41□□□□□ -0.9
H3F3A-201ENST00000366813 A0A1W2PQ45 241 aaPredicted RBP9.41□□□□□ -0.9
H3F3A-201ENST00000366813 A0A1W2PQY0 241 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 B2RBV5 119 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 B8ZZF3 427 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 ZNF205O95201 554 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 GSNP06396 782 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 CCL5P13501 91 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 PI3P19957 117 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 CTSKP43235 329 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 ERVFRD-1P60508 538 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 SLC7A5Q01650 507 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 TMEM62Q0P6H9 643 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 KIR3DS1Q14943 382 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 RAB3GAP1Q15042 981 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 GNPTABQ3T906 1256 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 NOL9Q5SY16 702 aaKnown RBP9.41□□□□□ -0.9
H3F3A-201ENST00000366813 TDRD10Q5VZ19 366 aaKnown RBP9.41□□□□□ -0.9
H3F3A-201ENST00000366813 DDX46Q7L014 1031 aaKnown RBP9.41□□□□□ -0.9
H3F3A-201ENST00000366813 AGBL3Q8NEM8 1001 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 NUP43Q8NFH3 380 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 SNX27Q96L92 541 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 ERVK13-1Q9NX77 482 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 PRR13Q9NZ81 148 aa9.41□□□□□ -0.9
H3F3A-201ENST00000366813 KRTAP9-7A8MTY7 169 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 N4BP3O15049 544 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 DDAH1O94760 285 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 GJB6O95452 261 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 HOXA5P20719 270 aa9.4□□□□□ -0.9
H3F3A-201ENST00000366813 YBX1P67809 324 aaKnown RBP9.4□□□□□ -0.9
H3F3A-201ENST00000366813 GPSM2P81274 684 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms