RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 NOLC1Q14978 699 aaKnown RBP eCLIP4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 TERF2Q15554 542 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 TBC1D10BQ4KMP7 808 aaPredicted RBP4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 PRAMEF9Q5VWM5 478 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 GRAMD4Q6IC98 578 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 UNQ6494/PRO21346Q6UXR6 183 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 RALYLQ86SE5 291 aaKnown RBP4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 NME9Q86XW9 330 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 PASD1Q8IV76 773 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 BCL6BQ8N143 479 aaPredicted RBP4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 AFAP1L2Q8N4X5 818 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 C7orf31Q8N865 590 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 RELTQ969Z4 430 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 ZNF496Q96IT1 587 aaPredicted RBP4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 MYL10Q9BUA6 226 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 KIAA1683Q9H0B3 1180 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 Q9UFV3 132 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 FBXO10Q9UK96 956 aa4.57□□□□□ -1.68
RNU4-48P-201ENST00000365559 SBNO2Q9Y2G9 1366 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 FOXD2O60548 495 aaPredicted RBP4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 MAFO75444 373 aaPredicted RBP4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 PRPF6O94906 941 aaKnown RBP4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 APOL3O95236 402 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 CNOT4O95628 575 aaKnown RBP4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 CD40P25942 277 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 ANTXR2P58335 489 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 PHC1P78364 1004 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 OCRLQ01968 901 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 ADCY1Q08828 1119 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 TBR1Q16650 682 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 ATP13A4Q4VNC1 1196 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 BROXQ5VW32 411 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 TRIM68Q6AZZ1 485 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 ZNF662Q6ZS27 426 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 KRT26Q7Z3Y9 468 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 PLEKHH3Q7Z736 793 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 C11orf74Q86VG3 221 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 PHYKPLQ8IUZ5 450 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 ZZZ3Q8IYH5 903 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 IFNL2Q8IZJ0 200 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 CXorf38Q8TB03 319 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 USP7Q93009 1102 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 PTPN18Q99952 460 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 BDH2Q9BUT1 245 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 FAM126AQ9BYI3 521 aaPredicted RBP4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 IFT22Q9H7X7 185 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 PPP4R1LQ9P1A2 415 aa4.56□□□□□ -1.68
RNU4-48P-201ENST00000365559 ELL2O00472 640 aaPredicted RBP4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 LAMTOR5O43504 91 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 PLATP00750 562 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 EPHB4P54760 987 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 PPP2CBP62714 309 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 PPP2CAP67775 309 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 ADCY2Q08462 1091 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 PCOLCEQ15113 449 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 DDB1Q16531 1140 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 ZNF827Q17R98 1081 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 CT47A1Q5JQC4 288 aaPredicted RBP4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 GPR158Q5T848 1215 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 TIGD7Q6NT04 549 aaPredicted RBP4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 ARHGEF18Q6ZSZ5 1173 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 KANSL1Q7Z3B3 1105 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 LIMS2Q7Z4I7 341 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 FILIP1Q7Z7B0 1213 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 ZNF610Q8N9Z0 462 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 OR5AN1Q8NGI8 311 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 SLC5A5Q92911 643 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 SCYL1Q96KG9 808 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 TTC1Q99614 292 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 MSRAQ9UJ68 235 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 PRKAB1Q9Y478 270 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 SLC4A7Q9Y6M7 1214 aa4.55□□□□□ -1.68
RNU4-48P-201ENST00000365559 ZNF536O15090 1300 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 KRTAP4-8A0A0G2JLE6 195 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 ZEB2O60315 1214 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 EYA4O95677 639 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 ITGB3P05106 788 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 POU3F3P20264 500 aaPredicted RBP4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 CNGA1P29973 690 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 LSP1P33241 339 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 MRE11P49959 708 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 MAP3K12Q12852 859 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 SURF1Q15526 300 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 RNF151Q2KHN1 245 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 ZBTB41Q5SVQ8 909 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 KIAA1841Q6NSI8 718 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 LHFPL2Q6ZUX7 228 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 RTKN2Q8IZC4 609 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 RBM15Q96T37 977 aaKnown RBP eCLIP4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 SSBP3Q9BWW4 388 aaPredicted RBP4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 MEGF9Q9H1U4 602 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 MTG2Q9H4K7 406 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 JADE2Q9NQC1 790 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 KCMF1Q9P0J7 381 aa4.54□□□□□ -1.68
RNU4-48P-201ENST00000365559 SYN1P17600 705 aa4.53□□□□□ -1.68
RNU4-48P-201ENST00000365559 MEOX1P50221 254 aa4.53□□□□□ -1.68
RNU4-48P-201ENST00000365559 BCAR1P56945 870 aa4.53□□□□□ -1.68
RNU4-48P-201ENST00000365559 NFKB2Q00653 900 aa4.53□□□□□ -1.68
RNU4-48P-201ENST00000365559 PLP2Q04941 152 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms