RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 SEMA4AQ9H3S1 761 aa3.35□□□□□ -1.87
RNU4-56P-201ENST00000364700 TOPORSQ9NS56 1045 aaPredicted RBP3.35□□□□□ -1.87
RNU4-56P-201ENST00000364700 TRHDEQ9UKU6 1024 aa3.35□□□□□ -1.87
RNU4-56P-201ENST00000364700 TMPRSS11EQ9UL52 423 aa3.35□□□□□ -1.87
RNU4-56P-201ENST00000364700 ATP23Q9Y6H3 246 aa3.35□□□□□ -1.87
RNU4-56P-201ENST00000364700 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 TRIM75PA6NK02 468 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 GOLGA6L22H0YM25 854 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 H7C1D1 291 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 SCDO00767 359 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 PARNO95453 639 aaKnown RBP3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 C8BP07358 591 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 CPEP16870 476 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 KPNA1P52294 538 aaPredicted RBP3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 KIF11P52732 1056 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 SESN3P58005 492 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 IL2P60568 153 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 KRT85P78386 507 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 FAM50AQ14320 339 aaKnown RBP3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 TTF1Q15361 905 aaPredicted RBP3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 CT47A1Q5JQC4 288 aaPredicted RBP3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 SYDE2Q5VT97 1194 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 CRIP3Q6Q6R5 217 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 TEPPQ6URK8 271 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 GLB1LQ6UWU2 654 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 KANSL1Q7Z3B3 1105 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 MILR1Q7Z6M3 343 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 RASSF3Q86WH2 238 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 SLC41A1Q8IVJ1 513 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 LMBR1Q8WVP7 490 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 ASB15Q8WXK1 588 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 C11orf84Q9BUA3 381 aaPredicted RBP3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 MRIQ9BWK5 157 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 AMNQ9BXJ7 453 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 ZDHHC5Q9C0B5 715 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 SCAND2PQ9GZW5 306 aaPredicted RBP3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 SLITRK6Q9H5Y7 841 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 BCAS3Q9H6U6 928 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 ACSS2Q9NR19 701 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 DTLQ9NZJ0 730 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 RBPJLQ9UBG7 517 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 INVSQ9Y283 1065 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 ZKSCAN5Q9Y2L8 839 aa3.34□□□□□ -1.87
RNU4-56P-201ENST00000364700 MROH6A6NGR9 719 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 ELL2O00472 640 aaPredicted RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 PCDHGA12O60330 932 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 MAFKO60675 156 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 FZD7O75084 574 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 ULK1O75385 1050 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 MAFO75444 373 aaPredicted RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 ALDH1L1O75891 902 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 SLPIP03973 132 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 CYP17A1P05093 508 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 MMEP08473 750 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 GPR3P46089 330 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 OCRLQ01968 901 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 KRTAP1-1Q07627 177 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 DBPQ10586 325 aaPredicted RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 SMAD4Q13485 552 aaKnown RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 SURF1Q15526 300 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 DDB1Q16531 1140 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 NFE2Q16621 373 aaPredicted RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZBTB41Q5SVQ8 909 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 BTBD8Q5XKL5 378 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 CD276Q5ZPR3 534 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 USP51Q70EK9 711 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 TRIM48Q8IWZ4 208 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 Q8N1X5 172 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 TTLL6Q8N841 843 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 DTX3Q8N9I9 347 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 SH3RF3Q8TEJ3 882 aaPredicted RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 USP33Q8TEY7 942 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 DDX11Q96FC9 970 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 CDK5RAP1Q96SZ6 601 aaKnown RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 SYT3Q9BQG1 590 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 GORASP1Q9BQQ3 440 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 RTFDC1Q9BY42 306 aaPredicted RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 SLC13A1Q9BZW2 595 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 HAPLN2Q9GZV7 340 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 AP5M1Q9H0R1 490 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 PRDM12Q9H4Q4 367 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 METTL14Q9HCE5 456 aaKnown RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 TCF7L1Q9HCS4 588 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 PCDHGA9Q9Y5G4 932 aaKnown RBP3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 PCDHGA8Q9Y5G5 932 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 PCDHGA7Q9Y5G6 932 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 PCDHGA6Q9Y5G7 932 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 PCDHGA3Q9Y5H0 932 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 PCDHGA2Q9Y5H1 932 aa3.33□□□□□ -1.88
RNU4-56P-201ENST00000364700 ZNF839A8K0R7 811 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 FOXP2O15409 715 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 ABLIM3O94929 683 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 FBXO21O94952 628 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 IL18BPO95998 194 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 PRLP01236 227 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 COL6A1P12109 1028 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 MC4RP32245 332 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 IARSP41252 1262 aaKnown RBP3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 NEK2P51955 445 aa3.32□□□□□ -1.88
RNU4-56P-201ENST00000364700 MANFP55145 182 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms