RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 GAGE13Q4V321 117 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 NAIF1Q69YI7 327 aaPredicted RBP3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 KLHDC10Q6PID8 442 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 NSMFQ6X4W1 530 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 ADGRG3Q86Y34 549 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 ZC3H7AQ8IWR0 971 aaKnown RBP3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 FBXW5Q969U6 566 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 TMEM176AQ96HP8 235 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 AMNQ9BXJ7 453 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 CDC42EP3Q9UKI2 254 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 MAN2B1O00754 1011 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 GJB6O95452 261 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 SSBP05455 408 aaKnown RBP eCLIP3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 LACTBP83111 547 aaPredicted RBP3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 HDLBPQ00341 1268 aaKnown RBP3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 FAM111BQ6SJ93 734 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 Q6ZRM9 215 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 ZNF276Q8N554 614 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 GPR150Q8NGU9 434 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 CALML6Q8TD86 181 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 OSBP2Q969R2 916 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 ZNF669Q96BR6 464 aaPredicted RBP3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 SLC7A6OSQ96CW6 309 aaPredicted RBP3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 BBC3Q96PG8 261 aaPredicted RBP3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 GPR87Q9BY21 358 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 FAM184BQ9ULE4 1060 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 ASB1Q9Y576 335 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 HS3ST4Q9Y661 456 aa3.76□□□□□ -1.81
RNU6-238P-201ENST00000363313 PRODHO43272 600 aa3.75□□□□□ -1.81
RNU6-238P-201ENST00000363313 B3GALT2O43825 422 aa3.75□□□□□ -1.81
RNU6-238P-201ENST00000363313 MFAP3LO75121 409 aa3.75□□□□□ -1.81
RNU6-238P-201ENST00000363313 APEX1P27695 318 aaKnown RBP3.75□□□□□ -1.81
RNU6-238P-201ENST00000363313 RABGGTBP53611 331 aa3.75□□□□□ -1.81
RNU6-238P-201ENST00000363313 GLCCI1Q86VQ1 547 aa3.75□□□□□ -1.81
RNU6-238P-201ENST00000363313 ST13P5Q8NFI4 369 aaPredicted RBP3.75□□□□□ -1.81
RNU6-238P-201ENST00000363313 NELL1Q92832 810 aa3.75□□□□□ -1.81
RNU6-238P-201ENST00000363313 C16orf92Q96LL3 132 aa3.75□□□□□ -1.81
RNU6-238P-201ENST00000363313 TRAV20A0A0B4J274 112 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 KLRG2A4D1S0 409 aaPredicted RBP3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 GRID2IPA4D2P6 1211 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 PRAMEF25A6NGN4 478 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 PROB1E7EW31 1015 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 RPS6KA4O75676 772 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 IPO13O94829 963 aaKnown RBP3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 ABHD16AO95870 558 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 AMY2AP04746 511 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 AMY2BP19961 511 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 SAFB2Q14151 953 aaKnown RBP eCLIP3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 ELAVL1Q15717 326 aaKnown RBP3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 CRY1Q16526 586 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 LRRC55Q6ZSA7 311 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 LRRC47Q8N1G4 583 aaKnown RBP3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 PROKR1Q8TCW9 393 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 MNTQ99583 582 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 CAPN10Q9HC96 672 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 CATSPERZQ9NTU4 200 aa3.74□□□□□ -1.81
RNU6-238P-201ENST00000363313 ZNF561-AS1K7EIQ3 104 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 ARVCFO00192 962 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 SDHAP31040 664 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 MC4RP32245 332 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 KRTAP10-9P60411 292 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 ATP2C1P98194 919 aaPredicted RBP3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 DCAF17Q5H9S7 520 aaPredicted RBP3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 FAM47CQ5HY64 1035 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 METTL24Q5JXM2 366 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 OLFML1Q6UWY5 402 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 MICALCLQ6ZW33 695 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 OSTM1Q86WC4 334 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 VRK3Q8IV63 474 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 BCL6BQ8N143 479 aaPredicted RBP3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 MDGA1Q8NFP4 955 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 PCDH19Q8TAB3 1148 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 PTPRN2Q92932 1015 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 TCF25Q9BQ70 676 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 ACBD3Q9H3P7 528 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 CCSER2Q9H7U1 834 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 SYNPO2LQ9H987 977 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 ARHGEF4Q9NR80 690 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 UCKL1Q9NWZ5 548 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 MRVI1Q9Y6F6 885 aa3.73□□□□□ -1.81
RNU6-238P-201ENST00000363313 GRXCR1A8MXD5 290 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 GOLGA6L22H0YM25 854 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 ERBB2P04626 1255 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 STAT5BP51692 787 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 ADAM8P78325 824 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 PLEKHG4Q58EX7 1191 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 HECTD2Q5U5R9 776 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 KCNV1Q6PIU1 500 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 LRSAM1Q6UWE0 723 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 GAREM2Q75VX8 874 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 PTRH1Q86Y79 214 aaKnown RBP3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 GCDHQ92947 438 aaPredicted RBP3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 GPHA2Q96T91 129 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 KCNH7Q9NS40 1196 aa3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 SAE1Q9UBE0 346 aaPredicted RBP3.72□□□□□ -1.81
RNU6-238P-201ENST00000363313 ASXL2Q76L83 1435 aa3.71□□□□□ -1.82
RNU6-238P-201ENST00000363313 TRIM24O15164 1050 aa3.71□□□□□ -1.82
RNU6-238P-201ENST00000363313 RECQL4O94761 1208 aa3.71□□□□□ -1.82
RNU6-238P-201ENST00000363313 ETFBP38117 255 aa3.71□□□□□ -1.82
RNU6-238P-201ENST00000363313 JAM2P57087 298 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms