RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CTTNQ14247 550 aaKnown RBP11.54□□□□□ -0.56
SMC3-201ENST00000361804 TMEM59LQ9UK28 342 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 PPP1R9AQ9ULJ8 1098 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 NFS1Q9Y697 457 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 ABCB11O95342 1321 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 PHF20L1A8MW92 1017 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 USP11P51784 963 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 MRPL12P52815 198 aaKnown RBP11.54□□□□□ -0.56
SMC3-201ENST00000361804 TNNC1P63316 161 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 IKQ13123 557 aaPredicted RBP11.54□□□□□ -0.56
SMC3-201ENST00000361804 SEMA3FQ13275 785 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 MMS22LQ6ZRQ5 1243 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 MAEAQ7L5Y9 396 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 LNX1Q8TBB1 728 aaPredicted RBP11.54□□□□□ -0.56
SMC3-201ENST00000361804 SH2D3AQ9BRG2 576 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 TMBIM4Q9HC24 238 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 TMOD4Q9NZQ9 345 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 ATP8A1Q9Y2Q0 1164 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 DOCK5Q9H7D0 1870 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 CPP00450 1065 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 AFPP02771 609 aaKnown RBP11.54□□□□□ -0.56
SMC3-201ENST00000361804 SPIRE1Q08AE8 756 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 GLE1Q53GS7 698 aaKnown RBP11.54□□□□□ -0.56
SMC3-201ENST00000361804 DACT2Q5SW24 774 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 DCAF12L1Q5VU92 463 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 ARHGEF26Q96DR7 871 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 CEP63Q96MT8 703 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
SMC3-201ENST00000361804 ASTN1O14525 1302 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 TISP43B9A030 160 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 MEIS2O14770 477 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 FGGP02679 453 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 SHBGP04278 402 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 ZBTB48P10074 688 aaPredicted RBP11.54□□□□□ -0.56
SMC3-201ENST00000361804 XRCC5P13010 732 aaKnown RBP11.54□□□□□ -0.56
SMC3-201ENST00000361804 FNTAP49354 379 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 ARHGAP44Q17R89 818 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 SCFD2Q8WU76 684 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 IQCDQ96DY2 449 aa11.54□□□□□ -0.56
SMC3-201ENST00000361804 MEFVO15553 781 aaPredicted RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 BUB1BO60566 1050 aaPredicted RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 NR3C1P04150 777 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 EEF2P13639 858 aaKnown RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 HSPA9P38646 679 aaKnown RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 GALCP54803 685 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 MAGOHP61326 146 aaKnown RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 DHX9Q08211 1270 aaKnown RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 SF3B2Q13435 895 aaKnown RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 EPHA7Q15375 998 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 KNOP1Q1ED39 458 aaKnown RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 MAGOHBQ96A72 148 aaKnown RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 ISCUQ9H1K1 167 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 KCNMB3Q9NPA1 279 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 ACP6Q9NPH0 428 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 TMEM110-MUSTN1A8MSY1 372 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 KIAA0754O94854 1291 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 ARHGAP4P98171 946 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 SLC35C1Q96A29 364 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 GCOM1H8Y6P7 765 aaPredicted RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 MYZAPP0CAP1 466 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 MARCKSL1P49006 195 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 CYP2J2P51589 502 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 BANK1Q8NDB2 785 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 SYN2Q92777 582 aaPredicted RBP11.53□□□□□ -0.56
SMC3-201ENST00000361804 LENG9Q96B70 501 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 CYFIP2Q96F07 1278 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 WDR90Q96KV7 1748 aa11.53□□□□□ -0.56
SMC3-201ENST00000361804 FOXO6A8MYZ6 492 aa11.52□□□□□ -0.56
SMC3-201ENST00000361804 PGRMC1O00264 195 aaKnown RBP11.52□□□□□ -0.56
SMC3-201ENST00000361804 EVI5O60447 810 aa11.52□□□□□ -0.56
SMC3-201ENST00000361804 ACTN3Q08043 901 aaPredicted RBP11.52□□□□□ -0.56
SMC3-201ENST00000361804 SEPT2Q15019 361 aa11.52□□□□□ -0.56
SMC3-201ENST00000361804 ZNF746Q6NUN9 644 aaPredicted RBP11.52□□□□□ -0.56
SMC3-201ENST00000361804 OLIG1Q8TAK6 271 aa11.52□□□□□ -0.56
SMC3-201ENST00000361804 RBM17Q96I25 401 aaKnown RBP11.52□□□□□ -0.56
SMC3-201ENST00000361804 EDEM3Q9BZQ6 932 aa11.52□□□□□ -0.56
SMC3-201ENST00000361804 MTFR1LQ9H019 292 aa11.52□□□□□ -0.56
SMC3-201ENST00000361804 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.56
SMC3-201ENST00000361804 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.56
SMC3-201ENST00000361804 TLDC2A0PJX2 215 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 CBWD6Q4V339 395 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 CBWD3Q5JTY5 395 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 CBWD5Q5RIA9 395 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 WHAMMQ8TF30 809 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 LUC7LQ9NQ29 371 aaKnown RBP11.52□□□□□ -0.57
SMC3-201ENST00000361804 CNTNAP1P78357 1384 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
SMC3-201ENST00000361804 GUCY2CP25092 1073 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 KRT71Q3SY84 523 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 MSL1Q68DK7 614 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 NT5DC3Q86UY8 548 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 ETNPPLQ8TBG4 499 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 JPH2Q9BR39 696 aaPredicted RBP11.52□□□□□ -0.57
SMC3-201ENST00000361804 PKD2L1Q9P0L9 805 aa11.52□□□□□ -0.57
SMC3-201ENST00000361804 A0A1W2PRG0 241 aa11.51□□□□□ -0.57
SMC3-201ENST00000361804 PLCG2P16885 1265 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms