RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TMEM39BQ9GZU3 492 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 MYO3AQ8NEV4 1616 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 CPP00450 1065 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 HOXA7P31268 230 aaPredicted RBP20.01■□□□□ 0.79
CLIP2-202ENST00000361545 MYLK4Q86YV6 388 aaPredicted RBP20.01■□□□□ 0.79
CLIP2-202ENST00000361545 KIAA1586Q9HCI6 787 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 PCDHA10Q9Y5I2 948 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 GOLGA8CPA6NN73 597 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 PSMA2P25787 234 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 BAATQ14032 418 aaPredicted RBP20.01■□□□□ 0.79
CLIP2-202ENST00000361545 CCDC170Q8IYT3 715 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 RUNDC3BQ96NL0 473 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 EPB41L5Q9HCM4 733 aa20.01■□□□□ 0.79
CLIP2-202ENST00000361545 USP42Q9H9J4 1324 aaKnown RBP20■□□□□ 0.79
CLIP2-202ENST00000361545 PPP6R3Q5H9R7 873 aaPredicted RBP20■□□□□ 0.79
CLIP2-202ENST00000361545 PARD3BQ8TEW8 1205 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 SH2D3AQ9BRG2 576 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 CPS1P31327 1500 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 HEXIM1O94992 359 aaKnown RBP20■□□□□ 0.79
CLIP2-202ENST00000361545 EPHB1P54762 984 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 ARL13BQ3SXY8 428 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 CEP55Q53EZ4 464 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 TEX13BQ9BXU2 312 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 CNTNAP4Q9C0A0 1308 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 PPFIA4O75335 1185 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 PRR29P0C7W0 189 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 HHIPL2Q6UWX4 724 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 NOP9Q86U38 636 aaKnown RBP20■□□□□ 0.79
CLIP2-202ENST00000361545 BEST2Q8NFU1 509 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 ADAMTS13Q76LX8 1427 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 LMTK2Q8IWU2 1503 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 ENTPD3O75355 529 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 USP11P51784 963 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 ZNF543Q08ER8 600 aa20■□□□□ 0.79
CLIP2-202ENST00000361545 KIF28PB7ZC32 967 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 COPB2P35606 906 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 C2orf54Q08AI8 447 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 HDAC11Q96DB2 347 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 GCOM2Q9BZD3 368 aaPredicted RBP19.99■□□□□ 0.79
CLIP2-202ENST00000361545 CACYBPQ9HB71 228 aaKnown RBP19.99■□□□□ 0.79
CLIP2-202ENST00000361545 MYOZ2Q9NPC6 264 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 ADAM22Q9P0K1 906 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 INPP5BP32019 993 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 SEPT6Q14141 434 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 KNOP1Q1ED39 458 aaKnown RBP19.99■□□□□ 0.79
CLIP2-202ENST00000361545 RBM46Q8TBY0 533 aaKnown RBP19.99■□□□□ 0.79
CLIP2-202ENST00000361545 C2orf40Q9H1Z8 148 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 JPH1Q9HDC5 661 aaPredicted RBP19.99■□□□□ 0.79
CLIP2-202ENST00000361545 UBN1Q9NPG3 1134 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 PVALEFA0A1B0GWK0 134 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 WDR46O15213 610 aaKnown RBP19.99■□□□□ 0.79
CLIP2-202ENST00000361545 GNGT1P63211 74 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 RGL1Q9NZL6 768 aa19.99■□□□□ 0.79
CLIP2-202ENST00000361545 STYK1Q6J9G0 422 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 OR6J1Q8NGC5 347 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 TRIM56Q9BRZ2 755 aaKnown RBP19.98■□□□□ 0.79
CLIP2-202ENST00000361545 GBP1P32455 592 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 EFCC1Q9HA90 598 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 KCNH2Q12809 1159 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 SNAPC2Q13487 334 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 KCTD16Q68DU8 428 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 ARHGAP24Q8N264 748 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 GDAP1Q8TB36 358 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 PRDM5Q9NQX1 630 aaPredicted RBP19.98■□□□□ 0.79
CLIP2-202ENST00000361545 ZWINTO95229 277 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 STAT5BP51692 787 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 TSPY1Q01534 308 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 DIP2AQ14689 1571 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 TTC31Q49AM3 519 aaPredicted RBP19.98■□□□□ 0.79
CLIP2-202ENST00000361545 C10orf76Q5T2E6 689 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 ELMSAN1Q6PJG2 1045 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 URGCPQ8TCY9 931 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 FAM151AQ8WW52 585 aa19.98■□□□□ 0.79
CLIP2-202ENST00000361545 MRPL4Q9BYD3 311 aaKnown RBP19.98■□□□□ 0.79
CLIP2-202ENST00000361545 NOL3O60936 208 aaKnown RBP19.97■□□□□ 0.79
CLIP2-202ENST00000361545 FAM114A2Q9NRY5 505 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 ATP8A1Q9Y2Q0 1164 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 GANCQ8TET4 914 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 LPAR1Q92633 364 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 DEFB129Q9H1M3 183 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 AP1M1Q9BXS5 423 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 KLHL14Q9P2G3 628 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 ZNF609O15014 1411 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 S100BP04271 92 aaPredicted RBP19.97■□□□□ 0.79
CLIP2-202ENST00000361545 SPZ1Q9BXG8 430 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 RASSF4Q9H2L5 321 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 JRKLQ9Y4A0 524 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 C19orf81C9J6K1 198 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 VAMP7P51809 220 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 RNF149Q8NC42 400 aa19.97■□□□□ 0.79
CLIP2-202ENST00000361545 DYNC1LI2O43237 492 aaPredicted RBP19.96■□□□□ 0.79
CLIP2-202ENST00000361545 HIP1RO75146 1068 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 GGPS1O95749 300 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 CYP2B6P20813 491 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 ORC2Q13416 577 aaPredicted RBP19.96■□□□□ 0.79
CLIP2-202ENST00000361545 TMEM35BQ8NCS4 154 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 SCINQ9Y6U3 715 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 ZBED1O96006 694 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 FBXO33Q7Z6M2 555 aa19.96■□□□□ 0.79
CLIP2-202ENST00000361545 LMCD1Q9NZU5 365 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms