RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 RIBC1Q8N443 379 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-203ENST00000361528 SYT2Q8N9I0 419 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-203ENST00000361528 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
CNOT4-203ENST00000361528 FMO2Q99518 471 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 ARHGAP20Q9P2F6 1191 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 DBF4Q9UBU7 674 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-203ENST00000361528 FRMD4BQ9Y2L6 1034 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 SSU72P8A0A1W2PR75 194 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 GTPBP6O43824 516 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-203ENST00000361528 ENTPD5O75356 428 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 DCTN3O75935 186 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 BMP15O95972 392 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 UBTFL6P0CB48 400 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-203ENST00000361528 ETS2P15036 469 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 FLT3P36888 993 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 CCT8P50990 548 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 POLGP54098 1239 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-203ENST00000361528 PMS2P54278 862 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 WDR72Q3MJ13 1102 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 MFSD5Q6N075 450 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 C4orf50Q6ZRC1 276 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 ARHGAP27Q6ZUM4 889 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 ZBED8Q8IZ13 594 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 NRG4Q8WWG1 115 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 CKAP2Q8WWK9 683 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 NECTIN2Q92692 538 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 ATP6V0A1Q93050 837 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 ZMYND12Q9H0C1 365 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 QPCTLQ9NXS2 382 aa12.49□□□□□ -0.41
CNOT4-203ENST00000361528 C9orf78Q9NZ63 289 aaPredicted RBP12.49□□□□□ -0.41
CNOT4-203ENST00000361528 UTP11Q9Y3A2 253 aaKnown RBP12.49□□□□□ -0.41
CNOT4-203ENST00000361528 MAP3K19Q56UN5 1328 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 EIF4A3P38919 411 aaKnown RBP12.48□□□□□ -0.41
CNOT4-203ENST00000361528 EMP3P54852 163 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 RCN1Q15293 331 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 MTFR1Q15390 333 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 NME9Q86XW9 330 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 ECHDC2Q86YB7 292 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
CNOT4-203ENST00000361528 GAB3Q8WWW8 586 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 EDC3Q96F86 508 aaKnown RBP12.48□□□□□ -0.41
CNOT4-203ENST00000361528 AZI2Q9H6S1 392 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 SYNCQ9H7C4 482 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 USP40Q9NVE5 1235 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 VPS54Q9P1Q0 977 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 STXBP5LQ9Y2K9 1186 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 FAM32AQ9Y421 112 aaKnown RBP12.48□□□□□ -0.41
CNOT4-203ENST00000361528 TTLL3Q9Y4R7 772 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 DISP2A7MBM2 1401 aa12.48□□□□□ -0.41
CNOT4-203ENST00000361528 SERPINB7O75635 380 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 CDK4P11802 303 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 PTPN4P29074 926 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 METAP2P50579 478 aaKnown RBP eCLIP12.47□□□□□ -0.41
CNOT4-203ENST00000361528 MAP3K10Q02779 954 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 SF3A3Q12874 501 aaKnown RBP eCLIP12.47□□□□□ -0.41
CNOT4-203ENST00000361528 NAB2Q15742 525 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 MTHFSDQ2M296 383 aaKnown RBP12.47□□□□□ -0.41
CNOT4-203ENST00000361528 TYW1BQ6NUM6 668 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 SLC2A7Q6PXP3 512 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 DDX42Q86XP3 938 aaKnown RBP eCLIP12.47□□□□□ -0.41
CNOT4-203ENST00000361528 FAM186BQ8IYM0 893 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 ANKLE1Q8NAG6 615 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 SLC7A6OSQ96CW6 309 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-203ENST00000361528 VPS50Q96JG6 964 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 AIFM3Q96NN9 605 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 SCHIP1Q9P0W5 487 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-203ENST00000361528 SALL4Q9UJQ4 1053 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 ANGPTL2Q9UKU9 493 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 ZNF711Q9Y462 761 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 UTYO14607 1347 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 MYH1P12882 1939 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 A6NJR5 290 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 E9PBE3 544 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 MAPK13O15264 365 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 DAPK3O43293 454 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 PALMO75781 387 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 PDE5AO76074 875 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 MMP1P03956 469 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 ZCCHC18P0CG32 403 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 PYGMP11217 842 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 GNAT2P19087 354 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 ATP5DP30049 168 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 CA8P35219 290 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 TCF7P36402 384 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-203ENST00000361528 GRM2Q14416 872 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 KHDC1Q4VXA5 237 aaKnown RBP12.47□□□□□ -0.41
CNOT4-203ENST00000361528 HSP90AA5PQ58FG0 334 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 Q6ZNX1 250 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 ACAD11Q709F0 780 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 GET4Q7L5D6 327 aaPredicted RBP12.47□□□□□ -0.41
CNOT4-203ENST00000361528 TRIM50Q86XT4 487 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 BBS5Q8N3I7 341 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 PI4KAP1Q8N8J0 262 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 CASP10Q92851 521 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 TUBGCP2Q9BSJ2 902 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 MYLK2Q9H1R3 596 aa12.47□□□□□ -0.41
CNOT4-203ENST00000361528 NLRC4Q9NPP4 1024 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms