RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 RNF219Q5W0B1 726 aaPredicted RBP19.67■□□□□ 0.74
SHANK1-202ENST00000359082 HIBCHQ6NVY1 386 aaPredicted RBP19.67■□□□□ 0.74
SHANK1-202ENST00000359082 NDUFAF2Q8N183 169 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 ATICP31939 592 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 IL6STP40189 918 aaPredicted RBP19.67■□□□□ 0.74
SHANK1-202ENST00000359082 BZW1Q7L1Q6 419 aaKnown RBP19.67■□□□□ 0.74
SHANK1-202ENST00000359082 CENPKQ9BS16 269 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 PPARGC1AQ9UBK2 798 aaKnown RBP19.67■□□□□ 0.74
SHANK1-202ENST00000359082 ANAPC7Q9UJX3 599 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 DNAJC12Q9UKB3 198 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 ABT1Q9ULW3 272 aaKnown RBP19.67■□□□□ 0.74
SHANK1-202ENST00000359082 SAMD9Q5K651 1589 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 TBCCQ15814 346 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 PITPNM3Q9BZ71 974 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 BHMT2Q9H2M3 363 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 SUN2Q9UH99 717 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 SFMBT1Q9UHJ3 866 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 E2F6O75461 281 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 ALCAMQ13740 583 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 IMPG1Q17R60 797 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 SLFN12LQ6IEE8 588 aa19.67■□□□□ 0.74
SHANK1-202ENST00000359082 ST13P4Q8IZP2 240 aaPredicted RBP19.67■□□□□ 0.74
SHANK1-202ENST00000359082 CREB3O43889 395 aa19.66■□□□□ 0.74
SHANK1-202ENST00000359082 IREB2P48200 963 aaKnown RBP19.66■□□□□ 0.74
SHANK1-202ENST00000359082 PAPOLAP51003 745 aaKnown RBP19.66■□□□□ 0.74
SHANK1-202ENST00000359082 N4BP2L2Q92802 583 aaPredicted RBP19.66■□□□□ 0.74
SHANK1-202ENST00000359082 HEY1Q9Y5J3 304 aa19.66■□□□□ 0.74
SHANK1-202ENST00000359082 A0A087WUV0 522 aaPredicted RBP19.66■□□□□ 0.74
SHANK1-202ENST00000359082 LRRC63Q05C16 580 aa19.66■□□□□ 0.74
SHANK1-202ENST00000359082 RESTQ13127 1097 aa19.66■□□□□ 0.74
SHANK1-202ENST00000359082 FAM160B2Q86V87 743 aa19.66■□□□□ 0.74
SHANK1-202ENST00000359082 MMEP08473 750 aa19.66■□□□□ 0.74
SHANK1-202ENST00000359082 RGS9BPQ6ZS82 235 aa19.66■□□□□ 0.74
SHANK1-202ENST00000359082 SARS2Q9NP81 518 aaKnown RBP19.66■□□□□ 0.74
SHANK1-202ENST00000359082 IPO5O00410 1097 aaKnown RBP19.66■□□□□ 0.74
SHANK1-202ENST00000359082 MXD4Q14582 209 aaPredicted RBP19.66■□□□□ 0.74
SHANK1-202ENST00000359082 CATSPER4Q7RTX7 472 aa19.66■□□□□ 0.74
SHANK1-202ENST00000359082 GYS2P54840 703 aa19.66■□□□□ 0.74
SHANK1-202ENST00000359082 SMAD1Q15797 465 aaKnown RBP19.66■□□□□ 0.74
SHANK1-202ENST00000359082 INSRP06213 1382 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 STK25O00506 426 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 ADAMTS1Q9UHI8 967 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 EFCAB6Q5THR3 1501 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 DCTN3O75935 186 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 ARL4CP56559 192 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 ZNF667Q5HYK9 610 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 ALKBH5Q6P6C2 394 aaKnown RBP19.65■□□□□ 0.74
SHANK1-202ENST00000359082 SH3RF3Q8TEJ3 882 aaPredicted RBP19.65■□□□□ 0.74
SHANK1-202ENST00000359082 TRIM55Q9BYV6 548 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 FGFR1OP2Q9NVK5 253 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 CFAP65Q6ZU64 1925 aaKnown RBP19.65■□□□□ 0.74
SHANK1-202ENST00000359082 KIAA1755Q5JYT7 1200 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 MFAP3LO75121 409 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 SPARCL1Q14515 664 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 RBBP7Q16576 425 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 PPP4R3CPQ6ZMV5 832 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 SEPT8Q92599 483 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 ATP6V0A4Q9HBG4 840 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 PCDHA6Q9UN73 950 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 GDAQ9Y2T3 454 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 SNX24Q9Y343 169 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 PCDHA8Q9Y5H6 950 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 ABCB11O95342 1321 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 C1orf228Q6PIY5 440 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 RHOT2Q8IXI1 618 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 VPS11Q9H270 941 aa19.65■□□□□ 0.74
SHANK1-202ENST00000359082 PLEKHG1Q9ULL1 1385 aa19.64■□□□□ 0.74
SHANK1-202ENST00000359082 SYF2O95926 243 aaKnown RBP19.64■□□□□ 0.74
SHANK1-202ENST00000359082 GFPT1Q06210 699 aaPredicted RBP19.64■□□□□ 0.74
SHANK1-202ENST00000359082 NFX1Q12986 1120 aaKnown RBP19.64■□□□□ 0.74
SHANK1-202ENST00000359082 ZC3H18Q86VM9 953 aaKnown RBP19.64■□□□□ 0.74
SHANK1-202ENST00000359082 TEX2Q8IWB9 1127 aa19.64■□□□□ 0.74
SHANK1-202ENST00000359082 ZBED2Q9BTP6 218 aa19.64■□□□□ 0.74
SHANK1-202ENST00000359082 COG4Q9H9E3 785 aa19.64■□□□□ 0.74
SHANK1-202ENST00000359082 KIF17Q9P2E2 1029 aa19.64■□□□□ 0.74
SHANK1-202ENST00000359082 TRIM49BA6NDI0 452 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 VPS39Q96JC1 886 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 PLEKHF1Q96S99 279 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 EPM2AIP1Q7L775 607 aaPredicted RBP19.64■□□□□ 0.73
SHANK1-202ENST00000359082 SCN4BQ8IWT1 228 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 DYDC2Q96IM9 177 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 CNOT8Q9UFF9 292 aaKnown RBP19.64■□□□□ 0.73
SHANK1-202ENST00000359082 APOBEC2Q9Y235 224 aaKnown RBP19.64■□□□□ 0.73
SHANK1-202ENST00000359082 BBOX1O75936 387 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 MDM2Q00987 491 aaPredicted RBP19.64■□□□□ 0.73
SHANK1-202ENST00000359082 ACAD11Q709F0 780 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 ADAM22Q9P0K1 906 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 ZFP69BQ9UJL9 534 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 GYG2O15488 501 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 LTKP29376 864 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 GSPT2Q8IYD1 628 aaKnown RBP19.64■□□□□ 0.73
SHANK1-202ENST00000359082 RCOR1Q9UKL0 485 aa19.64■□□□□ 0.73
SHANK1-202ENST00000359082 TRPC5Q9UL62 973 aaPredicted RBP19.64■□□□□ 0.73
SHANK1-202ENST00000359082 DIS3Q9Y2L1 958 aaKnown RBP19.64■□□□□ 0.73
SHANK1-202ENST00000359082 SYCE1LA8MT33 242 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 RASA4BC9J798 803 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 H0Y3Z8 333 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 RASA4O43374 803 aa19.63■□□□□ 0.73
SHANK1-202ENST00000359082 LDHAP00338 332 aaKnown RBP19.63■□□□□ 0.73
SHANK1-202ENST00000359082 GPC3P51654 580 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms