RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 IQCKQ8N0W5 287 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 METTL13Q8N6R0 699 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 ACTRT1Q8TDG2 376 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 DYDC2Q96IM9 177 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 CSRNP1Q96S65 589 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 MRIQ9BWK5 157 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 TAF1DQ9H5J8 278 aaPredicted RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 ZNF219Q9P2Y4 722 aaPredicted RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 SERPINA10Q9UK55 444 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 MYH11P35749 1972 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 PIK3CDO00329 1044 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 DDX3XO00571 662 aaKnown RBP eCLIP9.36□□□□□ -0.91
RFX3-202ENST00000358730 EVI5O60447 810 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 CLSTN1O94985 981 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 FERP16591 822 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 STAT1P42224 750 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 CORO7P57737 925 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 ERVK-9P63128 1117 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 UBXN2AP68543 259 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 SKOR1P84550 965 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 BTNL9Q6UXG8 535 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 MAATS1Q7Z4T9 603 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 DAAM2Q86T65 1068 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 KSR1Q8IVT5 923 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 HSD17B14Q9BPX1 270 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 PARVGQ9HBI0 331 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 TUFT1Q9NNX1 390 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 NENFQ9UMX5 172 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 ATP8B3O60423 1300 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 F8VZ95 297 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 ZBTB39O15060 712 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 NPM3O75607 178 aaKnown RBP9.36□□□□□ -0.91
RFX3-202ENST00000358730 ECE1P42892 770 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 FKBP1AP62942 108 aaKnown RBP9.36□□□□□ -0.91
RFX3-202ENST00000358730 RRP1BQ14684 758 aaKnown RBP9.36□□□□□ -0.91
RFX3-202ENST00000358730 COG2Q14746 738 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 HS2ST1Q7LGA3 356 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 OTOP1Q7RTM1 612 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 COL23A1Q86Y22 540 aaPredicted RBP9.36□□□□□ -0.91
RFX3-202ENST00000358730 PIK3R5Q8WYR1 880 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.36□□□□□ -0.91
RFX3-202ENST00000358730 DDX47Q9H0S4 455 aaKnown RBP9.36□□□□□ -0.91
RFX3-202ENST00000358730 ISCUQ9H1K1 167 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 ATRNL1Q5VV63 1379 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 FRMPD4Q14CM0 1322 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 A0A0A6YYK5 440 aaPredicted RBP9.36□□□□□ -0.91
RFX3-202ENST00000358730 KRIT1O00522 736 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 GAS7O60861 476 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 SLITRK3O94933 977 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 SOX5P35711 763 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 MAGEA9P43362 315 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 FMO5P49326 533 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 CYP2J2P51589 502 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 SF3B2Q13435 895 aaKnown RBP9.36□□□□□ -0.91
RFX3-202ENST00000358730 SLC15A2Q16348 729 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 CCDC174Q6PII3 467 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 C1orf186Q6ZWK4 172 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 FAM178BQ8IXR5 827 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 SYCE1Q8N0S2 351 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 SCFD2Q8WU76 684 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 LMBR1Q8WVP7 490 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 BORCS6Q96GS4 357 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 CALR3Q96L12 384 aaKnown RBP9.36□□□□□ -0.91
RFX3-202ENST00000358730 PLAAQ9Y263 795 aa9.36□□□□□ -0.91
RFX3-202ENST00000358730 BRWD3Q6RI45 1802 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 FAM170AA1A519 330 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 EBAG9O00559 213 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 PSMD10O75832 226 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 TRIM49P0CI25 452 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 TRIM49CP0CI26 452 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 HSPA9P38646 679 aaKnown RBP9.35□□□□□ -0.91
RFX3-202ENST00000358730 PRELPP51888 382 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 PPP2R5CQ13362 524 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 CUL1Q13616 776 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 MSL1Q68DK7 614 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 GLYCTKQ8IVS8 523 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 KCTD17Q8N5Z5 321 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 LNX1Q8TBB1 728 aaPredicted RBP9.35□□□□□ -0.91
RFX3-202ENST00000358730 INTUQ9ULD6 942 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 GCOM1H8Y6P7 765 aaPredicted RBP9.35□□□□□ -0.91
RFX3-202ENST00000358730 SART1O43290 800 aaKnown RBP9.35□□□□□ -0.91
RFX3-202ENST00000358730 ZEB2O60315 1214 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 POLR2MP0CAP2 368 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 NR1D1P20393 614 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 ECHS1P30084 290 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 GALCP54803 685 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 DRAP1Q14919 205 aaPredicted RBP9.35□□□□□ -0.91
RFX3-202ENST00000358730 AOC3Q16853 763 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 CBWD6Q4V339 395 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 CBWD3Q5JTY5 395 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 CBWD5Q5RIA9 395 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 ODR4Q5SWX8 454 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 CEP85LQ5SZL2 805 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 SAMD1Q6SPF0 538 aaPredicted RBP9.35□□□□□ -0.91
RFX3-202ENST00000358730 STXBP4Q6ZWJ1 553 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 KRT27Q7Z3Y8 459 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 SLFN11Q7Z7L1 901 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 DDX42Q86XP3 938 aaKnown RBP eCLIP9.35□□□□□ -0.91
RFX3-202ENST00000358730 CD302Q8IX05 232 aa9.35□□□□□ -0.91
RFX3-202ENST00000358730 PROCA1Q8NCQ7 364 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms