RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 POSTNQ15063 836 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 CCDC92Q53HC0 331 aaPredicted RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 FKBP1CQ5VVH2 108 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 CYP4F22Q6NT55 531 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 APBB1IPQ7Z5R6 666 aaPredicted RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 CREG2Q8IUH2 290 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 STAG2Q8N3U4 1231 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 C1orf131Q8NDD1 294 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 DYNLL2Q96FJ2 89 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 AIFM3Q96NN9 605 aa10.12□□□□□ -0.79
SMARCAL1-202ENST00000358207 CENPFP49454 3210 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 IFIT3O14879 490 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 USO1O60763 962 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 POLR3DP05423 398 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 LDHBP07195 334 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 CMA1P23946 247 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 HOXD11P31277 338 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 HDAC4P56524 1084 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 TCERG1LQ5VWI1 586 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 SEPT14Q6ZU15 432 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 KRT26Q7Z3Y9 468 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 IQCF2Q8IXL9 164 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 OGFOD1Q8N543 542 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 CCDC197Q8NCU1 140 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 TGFBRAP1Q8WUH2 860 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 FAM136AQ96C01 138 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 ANKRD27Q96NW4 1050 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 SRPK1Q96SB4 655 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 ATP8A2Q9NTI2 1148 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 ABCF3Q9NUQ8 709 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 STIM2Q9P246 746 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 PAIP2BQ9ULR5 123 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 NFU1Q9UMS0 254 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 RFX7Q2KHR2 1363 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 CASP8AP2Q9UKL3 1982 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 PTPDC1A2A3K4 754 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 ORC4O43929 436 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 PAEPP09466 180 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 CCDC166P0CW27 439 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 ZBTB48P10074 688 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 KIF5AQ12840 1032 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 ZNF362Q5T0B9 420 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 TMTC1Q8IUR5 882 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 SLC17A8Q8NDX2 589 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 SH3RF3Q8TEJ3 882 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 PHKBQ93100 1093 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 MCM9Q9NXL9 1143 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 EHD2Q9NZN4 543 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 ZSWIM5Q9P217 1185 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 EFR3BQ9Y2G0 817 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 STK38LQ9Y2H1 464 aa10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 BAZ2AQ9UIF9 1905 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-202ENST00000358207 ESYT3A0FGR9 886 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 LSM1O15116 133 aaKnown RBP10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 NDUFB5O43674 189 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 CEP104O60308 925 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 CYP1A1P04798 512 aaPredicted RBP10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 SYKP43405 635 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 GUCY2FP51841 1108 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 KIAA0753Q2KHM9 967 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 C14orf80Q86SX3 495 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 SPATA4Q8NEY3 305 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 TRPV5Q9NQA5 729 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 GGT7Q9UJ14 662 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 CHMP2BQ9UQN3 213 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 DCDC2CA8MYV0 355 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 UBOX5O94941 541 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 MARCKSP29966 332 aaPredicted RBP10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 CLCN2P51788 898 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 HERVK_113P62684 666 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 GUCY2DQ02846 1103 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 TMED1Q13445 227 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 KRT32Q14532 448 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 RUFY4Q6ZNE9 571 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 ZNF804AQ7Z570 1209 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 EXOC8Q8IYI6 725 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 OR2W6PQ8NHA6 318 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 NCOA7Q8NI08 942 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 KCNG4Q8TDN1 519 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 WHAMMQ8TF30 809 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 NCSTNQ92542 709 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 ETNK2Q9NVF9 386 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 GGA3Q9NZ52 723 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 PLAAQ9Y263 795 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 ATP8A1Q9Y2Q0 1164 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 SPO11Q9Y5K1 396 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 TRIM43BA6NCK2 446 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 KRT38O76015 456 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 XBP1P17861 261 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 MSH2P43246 934 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 SERPINB4P48594 390 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 PEX5P50542 639 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 TRADDQ15628 312 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 CNPY1Q3B7I2 92 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 ZC2HC1CQ53FD0 456 aaPredicted RBP10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 ZNF280DQ6N043 979 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 CEP128Q6ZU80 1094 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 NANOGNBQ7Z5D8 188 aa10.1□□□□□ -0.79
SMARCAL1-202ENST00000358207 SULF1Q8IWU6 871 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms