RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 NDEL1Q9GZM8 345 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 DHX36Q9H2U1 1008 aaKnown RBP12.17□□□□□ -0.46
PSEN1-202ENST00000357710 IL20Q9NYY1 176 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 HERC5Q9UII4 1024 aaKnown RBP12.17□□□□□ -0.46
PSEN1-202ENST00000357710 MYH7P12883 1935 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 PDE5AO76074 875 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 VAV1P15498 845 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 TMED10P49755 219 aaKnown RBP12.17□□□□□ -0.46
PSEN1-202ENST00000357710 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 OLFML2BQ68BL8 750 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 ASRGL1Q7L266 308 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 CNGA4Q8IV77 575 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 PRCCQ92733 491 aaPredicted RBP12.17□□□□□ -0.46
PSEN1-202ENST00000357710 STOML1Q9UBI4 398 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 ZNF711Q9Y462 761 aa12.17□□□□□ -0.46
PSEN1-202ENST00000357710 PEX14O75381 377 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 CDK7P50613 346 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 MTMR3Q13615 1198 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 RASA2Q15283 850 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 ARL13BQ3SXY8 428 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 NXNQ6DKJ4 435 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 EIF1ADQ8N9N8 165 aaKnown RBP12.16□□□□□ -0.46
PSEN1-202ENST00000357710 SUN5Q8TC36 379 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 EFHD2Q96C19 240 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-202ENST00000357710 CCDC43Q96MW1 224 aaKnown RBP12.16□□□□□ -0.46
PSEN1-202ENST00000357710 TRPC7Q9HCX4 862 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 INTS13Q9NVM9 706 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 STIM2Q9P246 746 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 GCOM1H8Y6P7 765 aaPredicted RBP12.16□□□□□ -0.46
PSEN1-202ENST00000357710 MYZAPP0CAP1 466 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 KRT4P19013 534 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 TKTP29401 623 aaKnown RBP12.16□□□□□ -0.46
PSEN1-202ENST00000357710 CASP7P55210 303 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 ADKP55263 362 aaKnown RBP12.16□□□□□ -0.46
PSEN1-202ENST00000357710 STARD8Q92502 1023 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 KAZALD1Q96I82 304 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 HAUS4Q9H6D7 363 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 ZNF652Q9Y2D9 606 aa12.16□□□□□ -0.46
PSEN1-202ENST00000357710 F8W031 263 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 TSPAN1O60635 241 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 RAB11FIP3O75154 756 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 FBXO21O94952 628 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 OXSR1O95747 527 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 APOEP02649 317 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 KRT16P08779 473 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 LMNB1P20700 586 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 HMGB2P26583 209 aaKnown RBP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 KIF23Q02241 960 aaPredicted RBP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 BNIP1Q12981 228 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 NONOQ15233 471 aaKnown RBP eCLIP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 HLFQ16534 295 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 Q6ZNX1 250 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 IFT20Q8IY31 132 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 NUP93Q8N1F7 819 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 FAM129AQ9BZQ8 928 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 PLCB1Q9NQ66 1216 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 HBS1LQ9Y450 684 aaKnown RBP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 SNX9Q9Y5X1 595 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 EIF4E1BA6NMX2 242 aaKnown RBP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 APBB1O00213 710 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 IDH3BO43837 385 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 SERPINB3P29508 390 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 LIFRP42702 1097 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 MXI1P50539 228 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 E2F2Q14209 437 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 RCN2Q14257 317 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 PLS1Q14651 629 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 MARK2Q7KZI7 788 aaKnown RBP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 C14orf80Q86SX3 495 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 PATL1Q86TB9 770 aaKnown RBP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 NSMCE3Q96MG7 304 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 LSG1Q9H089 658 aaKnown RBP12.15□□□□□ -0.46
PSEN1-202ENST00000357710 TUBE1Q9UJT0 475 aa12.15□□□□□ -0.46
PSEN1-202ENST00000357710 O00370 1275 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 KMOO15229 486 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 SURF6O75683 361 aaKnown RBP12.14□□□□□ -0.47
PSEN1-202ENST00000357710 ATP5HO75947 161 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 CAMTA2O94983 1202 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-202ENST00000357710 LDHBP07195 334 aaKnown RBP12.14□□□□□ -0.47
PSEN1-202ENST00000357710 KCNQ4P56696 695 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 BASP1P80723 227 aaKnown RBP12.14□□□□□ -0.47
PSEN1-202ENST00000357710 TRIM29Q14134 588 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 MTF1Q14872 753 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-202ENST00000357710 SLC27A3Q5K4L6 730 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 VPS36Q86VN1 386 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 ST13P4Q8IZP2 240 aaPredicted RBP12.14□□□□□ -0.47
PSEN1-202ENST00000357710 DCLK2Q8N568 766 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 GOLM1Q8NBJ4 401 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 PIGOQ8TEQ8 1089 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 VMP1Q96GC9 406 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 SEC63Q9UGP8 760 aaKnown RBP12.14□□□□□ -0.47
PSEN1-202ENST00000357710 AGAP1Q9UPQ3 857 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 E9PBE3 544 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 PEX11AO75192 247 aa12.14□□□□□ -0.47
PSEN1-202ENST00000357710 CCNFP41002 786 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms