RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 DNAJC12Q9UKB3 198 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 FOXP2O15409 715 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 NR3C1P04150 777 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 CALB1P05937 261 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 USP11P51784 963 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 MTERF2Q49AM1 385 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 CIAPIN1Q6FI81 312 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 RAPH1Q70E73 1250 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 ERICH1Q86X53 443 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 ZNF710Q8N1W2 664 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 MSTO1Q9BUK6 570 aa12.62□□□□□ -0.39
COL9A1-202ENST00000357250 NOVA2Q9UNW9 492 aaKnown RBP12.62□□□□□ -0.39
COL9A1-202ENST00000357250 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.62□□□□□ -0.39
COL9A1-202ENST00000357250 PPLO60437 1756 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 MGEA5O60502 916 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 CASP1P29466 404 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 SERPINB6P35237 376 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 PXDNLA1KZ92 1463 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 GSG1L2A8MUP6 293 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 IREB2P48200 963 aaKnown RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 RFX5P48382 616 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 BASP1P80723 227 aaKnown RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 TBC1D10BQ4KMP7 808 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 SCYL3Q8IZE3 742 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 DNAAF3Q8N9W5 541 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 DHX38Q92620 1227 aaKnown RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 CALN1Q9BXU9 219 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 PNMA3Q9UL41 463 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 PPP1R9AQ9ULJ8 1098 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 MROH7-TTC4A0A0A0MT08 1334 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 OVOS2A0A0G2JMS6 1433 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 DCTN3O75935 186 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 GGPS1O95749 300 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 ZBED1O96006 694 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 FGGP02679 453 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 TBXAS1P24557 533 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 CXCR5P32302 372 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 RFC1P35251 1148 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 ATP2C1P98194 919 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 ZNF667Q5HYK9 610 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 OR6B2Q6IFH4 312 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 RNF207Q6ZRF8 634 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 SESTD1Q86VW0 696 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 ABI1Q8IZP0 508 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 LINC00116Q8NCU8 138 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 PYROXD1Q8WU10 500 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 MYCBPQ99417 103 aaPredicted RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 SERPINI1Q99574 410 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 ATP6V0A4Q9HBG4 840 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 ZNF609O15014 1411 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 FAM187AA6NFU0 413 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 ZRANB2O95218 330 aaKnown RBP eCLIP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 STMN1P16949 149 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 COG7P83436 770 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 KNOP1Q1ED39 458 aaKnown RBP12.61□□□□□ -0.39
COL9A1-202ENST00000357250 TRIM72Q6ZMU5 477 aa12.61□□□□□ -0.39
COL9A1-202ENST00000357250 MAPK13O15264 365 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 SNX1Q13596 522 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 THOC5Q13769 683 aaKnown RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 SIX6OS1Q8N1H7 587 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 PDCD7Q8N8D1 485 aaKnown RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 CCNYQ8ND76 341 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 NEDD1Q8NHV4 660 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 CD209Q9NNX6 404 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 MEGF6O75095 1541 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 ZMYND10O75800 440 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 LMNAP02545 664 aaKnown RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 MYBL1P10243 752 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 SKIP12755 728 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 ARL4CP56559 192 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 SF3A3Q12874 501 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 SPARCL1Q14515 664 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 ZNF512BQ96KM6 892 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 NUDCD1Q96RS6 583 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 KLC2Q9H0B6 622 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 SLITRK6Q9H5Y7 841 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 FAM8A1Q9UBU6 413 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 CPSF3Q9UKF6 684 aaKnown RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 CA4P22748 312 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 PRCPP42785 496 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 AP3M2P53677 418 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 PDIA5Q14554 519 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 ADAM22Q9P0K1 906 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 ANGPTL2Q9UKU9 493 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 PXDNQ92626 1479 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 UBN2Q6ZU65 1347 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 SPDYE16A6NNV3 312 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 DNAJC8O75937 253 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 CAMTA2O94983 1202 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 ZSCAN20P17040 1043 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-202ENST00000357250 GCKP35557 465 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 SPDYE2Q495Y8 402 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 KCTD17Q8N5Z5 321 aa12.6□□□□□ -0.39
COL9A1-202ENST00000357250 TIPINQ9BVW5 301 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms