RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TBCKQ8TEA7 893 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 OPTNQ96CV9 577 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 UPF3AQ9H1J1 476 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 CDC42BPBQ9Y5S2 1711 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 H3BRJ5 948 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 IPO5O00410 1097 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 CYBBP04839 570 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 GUCY2CP25092 1073 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 OCRLQ01968 901 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 TRIM59Q8IWR1 403 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 ACRBPQ8NEB7 543 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 NRBF2Q96F24 287 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF302Q9NR11 478 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 BAIAP2L1Q9UHR4 511 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 CDV3Q9UKY7 258 aaKnown RBP5.93□□□□□ -1.46
PTPRD-202ENST00000356435 KAT6BQ8WYB5 2073 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 SNX17Q15036 470 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 MAN2A1Q16706 1144 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 KIF19Q2TAC6 998 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF699Q32M78 642 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 MMS22LQ6ZRQ5 1243 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 HSPH1Q92598 858 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 TUBGCP2Q9BSJ2 902 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 TXLNGQ9NUQ3 528 aa5.93□□□□□ -1.46
PTPRD-202ENST00000356435 PRPF4O43172 522 aaKnown RBP eCLIP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 GPC3P51654 580 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ART3Q13508 389 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ME3Q16798 604 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 LRRC24Q50LG9 513 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 NR1H4Q96RI1 486 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 KIAA1586Q9HCI6 787 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ASNSD1Q9NWL6 643 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ASB14A6NK59 587 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ECE2O60344 883 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 PLS3P13797 630 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ESRRGP62508 458 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 SYTL3Q4VX76 610 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ERICH1Q86X53 443 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 MCPH1Q8NEM0 835 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 DESI2Q9BSY9 194 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 POLR3CQ9BUI4 534 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 C2orf40Q9H1Z8 148 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 KIF17Q9P2E2 1029 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 CLCA2Q9UQC9 943 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 RRP15Q9Y3B9 282 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 LRRN2O75325 713 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 HSPA4LO95757 839 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 CPB1P15086 417 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ACCSLQ4AC99 568 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ZNF560Q96MR9 790 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ZWILCHQ9H900 591 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 CNOT10Q9H9A5 744 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 COG4Q9H9E3 785 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 OLFML3Q9NRN5 406 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 KIF28PB7ZC32 967 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 DCAF4L1Q3SXM0 396 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 DDX53Q86TM3 631 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 RASSF3Q86WH2 238 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 NSUN6Q8TEA1 469 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 THAP9Q9H5L6 903 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 LSM7Q9UK45 103 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 USP17L5A8MUK1 530 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ANP32DO95626 131 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 MTMR1Q13613 665 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 IMPG1Q17R60 797 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 PDCD6IPQ8WUM4 868 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 SEPT8Q92599 483 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 TRAIPQ9BWF2 469 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 GCOM2Q9BZD3 368 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 FAM96AQ9H5X1 160 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 BSDC1Q9NW68 430 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 SHPRHQ149N8 1683 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 CARMIL3Q8ND23 1372 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 EXOC1LA0A1B0GW35 172 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 IGSF3O75054 1194 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 MMP10P09238 476 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 SFNP31947 248 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 PPARDQ03181 441 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 PRKCQQ04759 706 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 NFX1Q12986 1120 aaKnown RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 TBC1D10BQ4KMP7 808 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 MEI1Q5TIA1 1274 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 CENPUQ71F23 418 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 PDIK1LQ8N165 341 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 TTC8Q8TAM2 541 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 MAP4K1Q92918 833 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 TBC1D22BQ9NU19 505 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 FHOD1Q9Y613 1164 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 FCER1AP12319 257 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 GUCY2DQ02846 1103 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ZBTB17Q13105 803 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 TAS2R42Q7RTR8 314 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 CCDC197Q8NCU1 140 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 WRNIP1Q96S55 665 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 KLHL8Q9P2G9 620 aaPredicted RBP5.92□□□□□ -1.46
PTPRD-202ENST00000356435 DAAM1Q9Y4D1 1078 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 ZHX2Q9Y6X8 837 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 CEP152O94986 1710 aa5.92□□□□□ -1.46
PTPRD-202ENST00000356435 KDM1AO60341 852 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms