RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 MRPL40Q9NQ50 206 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 CFAP69A5D8W1 941 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 TCP10L2B9ZVM9 353 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 IPO5O00410 1097 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 SERPINB10P48595 397 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 DMC1Q14565 340 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 ZNF790Q6PG37 636 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 CHURC1Q8WUH1 139 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 ABCC12Q96J65 1359 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 DYTNA2CJ06 578 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 UBAP1LF5GYI3 381 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 ENO1P06733 434 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 TFAMQ00059 246 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 FAM160B1Q5W0V3 765 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 LONP2Q86WA8 852 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 ZCWPW1Q9H0M4 648 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 RNPEPQ9H4A4 650 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 A1BGP04217 495 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 TMED10P49755 219 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 DEPDC1Q5TB30 811 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 METTL23Q86XA0 190 aa11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 SNRNP27Q8WVK2 155 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 COPG1Q9Y678 874 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-201ENST00000356183 ORC4O43929 436 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 TJP3O95049 919 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 ARFIP2P53365 341 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 CNGA3Q16281 694 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 CYGBQ8WWM9 190 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 SLC12A6Q9UHW9 1150 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 TTC7AQ9ULT0 858 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 CAB39Q9Y376 341 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 KDM5CP41229 1560 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 IRX1P78414 480 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 BTBD6Q96KE9 485 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 EPAS1Q99814 870 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 KCNF1Q9H3M0 494 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 GOLGA8IPA6NC78 632 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 GOLGA8JA6NMD2 632 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 RNF135Q8IUD6 432 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 RFWD2Q8NHY2 731 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 MAGEF1Q9HAY2 307 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 NCK2O43639 380 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 GFPT1Q06210 699 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 LBRQ14739 615 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 GALNT17Q6IS24 598 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 UNC5CLQ8IV45 518 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 KPNA7A9QM74 516 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 DEAF1O75398 565 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 ATXN3P54252 364 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 POU5F1BQ06416 359 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 LINC00301Q8NCQ3 95 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 ZC3H15Q8WU90 426 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 DTNBP1Q96EV8 351 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 SARS2Q9NP81 518 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 ZSCAN32Q9NX65 697 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 FBXL5Q9UKA1 691 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 MLH1P40692 756 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 KCTD1Q719H9 257 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 MTBPQ96DY7 904 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 NRBP2Q9NSY0 501 aa11.78□□□□□ -0.52
GTF3C1-201ENST00000356183 PTPRTO14522 1441 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 H0Y626 953 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 TRIM16O95361 564 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 TBL3Q12788 808 aaKnown RBP11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 RESTQ13127 1097 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 BZW1Q7L1Q6 419 aaKnown RBP11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 PDIK1LQ8N165 341 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 PAGE5Q96GU1 130 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 ABHD8Q96I13 439 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 TTC25Q96NG3 672 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 MMTAG2Q9BU76 263 aaKnown RBP11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 ALG13Q9NP73 1137 aaKnown RBP11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 CFAP73A6NFT4 308 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 NBPF26B4DH59 902 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 FGAP02671 866 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 GAP43P17677 238 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 IFNA8P32881 189 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 ARL4CP56559 192 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 TFDP1Q14186 410 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 PASD1Q8IV76 773 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 NBPF15Q8N660 670 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 CCNYL1Q8N7R7 359 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 ZDHHC9Q9Y397 364 aa11.77□□□□□ -0.52
GTF3C1-201ENST00000356183 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 PODXLO00592 558 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 SCNN1DP51172 638 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 CERKLQ49MI3 558 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 PLEKHM3Q6ZWE6 761 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 TEX9Q8N6V9 391 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 USP44Q9H0E7 712 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 LGR6Q9HBX8 967 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 KCNA3P22001 575 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 GTF2IP78347 998 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 Q3C1V9 767 aa11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-201ENST00000356183 NSUN7Q8NE18 718 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms