RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 KRT71Q3SY84 523 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 TRIM72Q6ZMU5 477 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 TMTC3Q6ZXV5 915 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 THAP9Q9H5L6 903 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 TLK1Q9UKI8 766 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 GOLGA8SH3BPF8 625 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 TMCC1O94876 653 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 STAG3L1P0CL83 205 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 PDE1BQ01064 536 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 FSD1LQ9BXM9 530 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
FN1-204ENST00000356005 FNDC3AQ9Y2H6 1198 aaKnown RBP12.11□□□□□ -0.47
FN1-204ENST00000356005 IKBKBO14920 756 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 APOEP02649 317 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 SERPING1P05155 500 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 SNX17Q15036 470 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 MMEL1Q495T6 779 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 XXYLT1Q8NBI6 393 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 CHST13Q8NET6 341 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 PSMB7Q99436 277 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 TSSK1BQ9BXA7 367 aa12.11□□□□□ -0.47
FN1-204ENST00000356005 PIH1D3Q9NQM4 214 aaKnown RBP12.11□□□□□ -0.47
FN1-204ENST00000356005 EPN1Q9Y6I3 576 aaPredicted RBP12.11□□□□□ -0.47
FN1-204ENST00000356005 CTNND1O60716 968 aaKnown RBP12.1□□□□□ -0.47
FN1-204ENST00000356005 STX2P32856 288 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 GABBR1Q9UBS5 961 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 CD58P19256 250 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 ZNF445P59923 1031 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 PRR5LQ6MZQ0 368 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 XRRA1Q6P2D8 792 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 FAM173BQ6P4H8 233 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 CLGNO14967 610 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 EPHX2P34913 555 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 GRM4Q14833 912 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 VPS33BQ9H267 617 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 ASNSD1Q9NWL6 643 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 TJP2Q9UDY2 1190 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 PSMA2P25787 234 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 FRA10AC1Q70Z53 315 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 PCGF5Q86SE9 256 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 XPO4Q9C0E2 1151 aaKnown RBP12.1□□□□□ -0.47
FN1-204ENST00000356005 BHMT2Q9H2M3 363 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 OLA1Q9NTK5 396 aaKnown RBP12.1□□□□□ -0.47
FN1-204ENST00000356005 EPS15L1Q9UBC2 864 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 LRRC7Q96NW7 1537 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 MNAT1P51948 309 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 ST8SIA6P61647 398 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 CCDC170Q8IYT3 715 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 PGBD1Q96JS3 809 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 TUFT1Q9NNX1 390 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 DPP7Q9UHL4 492 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 ASAP2O43150 1006 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 KPNA6O60684 536 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 BRD1O95696 1058 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 VEGFAP15692 232 aaPredicted RBP12.1□□□□□ -0.47
FN1-204ENST00000356005 BARHL2Q9NY43 387 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 CHEK2O96017 543 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 IFNA8P32881 189 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 CTTNQ14247 550 aaKnown RBP12.1□□□□□ -0.47
FN1-204ENST00000356005 SGO2Q562F6 1265 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 ZNF589Q86UQ0 364 aaPredicted RBP12.1□□□□□ -0.47
FN1-204ENST00000356005 FAM151AQ8WW52 585 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 PBKQ96KB5 322 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 VCX3AQ9NNX9 186 aa12.1□□□□□ -0.47
FN1-204ENST00000356005 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 CARNS1A5YM72 827 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 CD4P01730 458 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 TAP1Q03518 808 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 LAMC2Q13753 1193 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 GLB1LQ6UWU2 654 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 VSIG1Q86XK7 387 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 MAGOHBQ96A72 148 aaKnown RBP12.09□□□□□ -0.47
FN1-204ENST00000356005 MOSPD1Q9UJG1 213 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 PRRG1O14668 218 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 VPS39Q96JC1 886 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 ANTXR1Q9H6X2 564 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 MYH11P35749 1972 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 SLC4A1P02730 911 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 KRT1P04264 644 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 PAPOLAP51003 745 aaKnown RBP12.09□□□□□ -0.47
FN1-204ENST00000356005 TMEM35BQ8NCS4 154 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 CARD6Q9BX69 1037 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 CYP26B1Q9NR63 512 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 RSPH14Q9UHP6 348 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 ORC4O43929 436 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 ADKP55263 362 aaKnown RBP12.09□□□□□ -0.47
FN1-204ENST00000356005 ARHGAP15Q53QZ3 475 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
FN1-204ENST00000356005 YWHAGP61981 247 aaKnown RBP eCLIP12.09□□□□□ -0.47
FN1-204ENST00000356005 SCARA5Q6ZMJ2 495 aa12.09□□□□□ -0.47
FN1-204ENST00000356005 CASQ2O14958 399 aaPredicted RBP12.09□□□□□ -0.47
FN1-204ENST00000356005 ZBED1O96006 694 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms