RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 TAS2R14Q9NYV8 317 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 CTNNAL1Q9UBT7 734 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 KCPQ6ZWJ8 1503 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 KIF1AQ12756 1690 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 USP17L10C9JJH3 530 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 RASGRF2O14827 1237 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 EVI5O60447 810 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 PCP11498 1178 aaKnown RBP14.74□□□□□ -0.05
TRIM4-203ENST00000355947 FAM182BQ5T319 152 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 ZNF449Q6P9G9 518 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 C6orf89Q6UWU4 347 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 TRPM8Q7Z2W7 1104 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 CCDC50Q8IVM0 306 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 TRIM59Q8IWR1 403 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 SPIRE2Q8WWL2 714 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 SH2D3AQ9BRG2 576 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 PKD1L3Q7Z443 1732 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 RNASELQ05823 741 aaKnown RBP14.74□□□□□ -0.05
TRIM4-203ENST00000355947 ZC2HC1CQ53FD0 456 aaPredicted RBP14.74□□□□□ -0.05
TRIM4-203ENST00000355947 GALNT17Q6IS24 598 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 INTS5Q6P9B9 1019 aaKnown RBP14.74□□□□□ -0.05
TRIM4-203ENST00000355947 SYCP3Q8IZU3 236 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 MYCT1Q8N699 235 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 PCIF1Q9H4Z3 704 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 FAM114A2Q9NRY5 505 aa14.74□□□□□ -0.05
TRIM4-203ENST00000355947 ZNF335Q9H4Z2 1342 aaPredicted RBP14.73□□□□□ -0.05
TRIM4-203ENST00000355947 AKAP3O75969 853 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 PON1P27169 355 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 MTM1Q13496 603 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 LRIG3Q6UXM1 1119 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 MREGQ8N565 214 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 ARHGEF26Q96DR7 871 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 PWWP2AQ96N64 755 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 LRRC27Q9C0I9 530 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 NSRP1Q9H0G5 558 aaKnown RBP14.73□□□□□ -0.05
TRIM4-203ENST00000355947 ACP6Q9NPH0 428 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 MTRF1LQ9UGC7 380 aaKnown RBP14.73□□□□□ -0.05
TRIM4-203ENST00000355947 AGAP1Q9UPQ3 857 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 LAMB4A4D0S4 1761 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 CCDC169A6NNP5 214 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 H0YGN5 161 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 C6orf229H3BNL8 230 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 M0R2N6 131 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 DDX3XO00571 662 aaKnown RBP eCLIP14.73□□□□□ -0.052e-6■□□□□ 9.5
TRIM4-203ENST00000355947 LCA5LO95447 670 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 TNFRSF8P28908 595 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 YTHDF3Q7Z739 585 aaKnown RBP14.73□□□□□ -0.05
TRIM4-203ENST00000355947 CPNE8Q86YQ8 564 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 CD302Q8IX05 232 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 SETDB2Q96T68 719 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 THAP2Q9H0W7 228 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 NFS1Q9Y697 457 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 CAMTA1Q9Y6Y1 1673 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 IGSF9BQ9UPX0 1349 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 CLGNO14967 610 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 NMT1P30419 496 aaKnown RBP14.73□□□□□ -0.05
TRIM4-203ENST00000355947 BIRC2Q13490 618 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 BYSLQ13895 437 aaKnown RBP14.73□□□□□ -0.05
TRIM4-203ENST00000355947 DRAP1Q14919 205 aaPredicted RBP14.73□□□□□ -0.05
TRIM4-203ENST00000355947 GRIPAP1Q4V328 841 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 TBC1D9BQ66K14 1250 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 ZNF572Q7Z3I7 529 aaPredicted RBP14.73□□□□□ -0.05
TRIM4-203ENST00000355947 VSIG1Q86XK7 387 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 PALB2Q86YC2 1186 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 JAMLQ86YT9 394 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 CCT6BQ92526 530 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 DNAJC19Q96DA6 116 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 FAM129AQ9BZQ8 928 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 RGL1Q9NZL6 768 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 RASAL2Q9UJF2 1139 aa14.73□□□□□ -0.05
TRIM4-203ENST00000355947 PCK1P35558 622 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 ALDH5A1P51649 535 aaPredicted RBP14.72□□□□□ -0.05
TRIM4-203ENST00000355947 TPH2Q8IWU9 490 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 SCFD2Q8WU76 684 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 C1orf54Q8WWF1 131 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 RUBCNQ92622 972 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 DDX23Q9BUQ8 820 aaKnown RBP14.72□□□□□ -0.05
TRIM4-203ENST00000355947 PPP1R12CQ9BZL4 782 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 ZNF287Q9HBT7 754 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 DNAJC12Q9UKB3 198 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 A0A1W2PRG0 241 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 CCDC188H7C350 402 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 DDX39AO00148 427 aaKnown RBP14.72□□□□□ -0.05
TRIM4-203ENST00000355947 MED24O75448 989 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 HOXA13P31271 388 aaPredicted RBP14.72□□□□□ -0.05
TRIM4-203ENST00000355947 STX2P32856 288 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 CALCOCO2Q13137 446 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 CYP4F22Q6NT55 531 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 IRF2BP2Q7Z5L9 587 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 KRT35Q92764 455 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 RNF25Q96BH1 459 aaPredicted RBP14.72□□□□□ -0.05
TRIM4-203ENST00000355947 ZBTB10Q96DT7 871 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 ZBTB21Q9ULJ3 1066 aa14.72□□□□□ -0.05
TRIM4-203ENST00000355947 CCNHP51946 323 aaPredicted RBP14.71□□□□□ -0.05
TRIM4-203ENST00000355947 TCP10Q12799 353 aa14.71□□□□□ -0.05
TRIM4-203ENST00000355947 COG2Q14746 738 aa14.71□□□□□ -0.05
TRIM4-203ENST00000355947 NFIXQ14938 502 aa14.71□□□□□ -0.05
TRIM4-203ENST00000355947 BARGINQ6ZT62 677 aa14.71□□□□□ -0.05
TRIM4-203ENST00000355947 SRRM1Q8IYB3 904 aaKnown RBP14.71□□□□□ -0.05
TRIM4-203ENST00000355947 ZBTB39O15060 712 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms