RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 CCDC68Q9H2F9 335 aa10.51□□□□□ -0.73
GABPA-201ENST00000354828 ARFGAP3Q9NP61 516 aa10.51□□□□□ -0.73
GABPA-201ENST00000354828 RRN3P2A6NIE6 340 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 CCDC85CA6NKD9 419 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 DGAT1O75907 488 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 GFPT2O94808 682 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 CYP27A1Q02318 531 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 RESTQ13127 1097 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 MXD4Q14582 209 aaPredicted RBP10.5□□□□□ -0.73
GABPA-201ENST00000354828 RGMBQ6NW40 437 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 ESYT2A0FGR8 921 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 CYP2C8P10632 490 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 KCNA4P22459 653 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 INHBEP58166 350 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 MXRA7P84157 204 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 ZBTB16Q05516 673 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 PRPSAP1Q14558 356 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 ARL13BQ3SXY8 428 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 MAN1B1Q9UKM7 699 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 BZW2Q9Y6E2 419 aaKnown RBP10.5□□□□□ -0.73
GABPA-201ENST00000354828 MAFGO15525 162 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 HBP1O60381 514 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 HIP1RO75146 1068 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 PARD3BQ8TEW8 1205 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 FAM217BQ9NTX9 383 aaPredicted RBP10.5□□□□□ -0.73
GABPA-201ENST00000354828 TSKSQ9UJT2 592 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 PCDHB7Q9Y5E2 793 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 MED1Q15648 1581 aaPredicted RBP10.5□□□□□ -0.73
GABPA-201ENST00000354828 MAN1A1P33908 653 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 VPS41P49754 854 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 EPHB1P54762 984 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 BFSP2Q13515 415 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 CUL4AQ13619 759 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 STOX1Q6ZVD7 989 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 SAAL1Q96ER3 474 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 ZNF560Q96MR9 790 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 TMEM63CQ9P1W3 806 aa10.5□□□□□ -0.73
GABPA-201ENST00000354828 ATXN8OSP0DMR3 200 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 GCLMP48507 274 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 RNF187Q5TA31 235 aaPredicted RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 TAOK1Q7L7X3 1001 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 FBXO16Q8IX29 292 aaPredicted RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 NLGN2Q8NFZ4 835 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.49□□□□□ -0.73
GABPA-201ENST00000354828 PPP1R9AQ9ULJ8 1098 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 FNDC3AQ9Y2H6 1198 aaKnown RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 V9GYY5 206 aaPredicted RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 OPA1O60313 960 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 ITGA4P13612 1032 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 RAG1P15918 1043 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 LRRC63Q05C16 580 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 PPATQ06203 517 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 CFAP221Q4G0U5 840 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 EFCAB12Q6NXP0 572 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 PPP1R2P3Q6NXS1 205 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 XRRA1Q6P2D8 792 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 HAUS6Q7Z4H7 955 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 GLYCTKQ8IVS8 523 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 CTAGE3PQ8IX95 158 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 MXRA8Q9BRK3 442 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 SPATC1LQ9H0A9 340 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 HMX1Q9NP08 348 aaPredicted RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 PFDN4Q9NQP4 134 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 AGO2Q9UKV8 859 aaKnown RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 NR2E3Q9Y5X4 410 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 POLR1AO95602 1720 aaPredicted RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 PP2D1A8MPX8 630 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 A8MXQ7 604 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 KCNK3O14649 394 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 CD2BP2O95400 341 aaKnown RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 SUPT20HL2P0C7V6 817 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 TM4SF1P30408 202 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 ALDH3A1P30838 453 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 GUCY1A2P33402 732 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 PRKCEQ02156 737 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 KRT17Q04695 432 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 KYAT1Q16773 422 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 RWDD4Q6NW29 188 aaKnown RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 ZNF449Q6P9G9 518 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 SRGAP1Q7Z6B7 1085 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 ERICH1Q86X53 443 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 SMAP1Q8IYB5 467 aaPredicted RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 LRRC71Q8N4P6 559 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 TRIM7Q9C029 511 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 TUFT1Q9NNX1 390 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 AAASQ9NRG9 546 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 FAM205AQ6ZU69 1335 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 PRPSAP2O60256 369 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 NR3C1P04150 777 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 HOXA7P31268 230 aaPredicted RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 TCF7P36402 384 aaPredicted RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 LGSNQ5TDP6 509 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 ZBTB9Q96C00 473 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 PLCD4Q9BRC7 762 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 RBAKQ9NYW8 714 aaPredicted RBP10.49□□□□□ -0.73
GABPA-201ENST00000354828 SEL1LQ9UBV2 794 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 ZNF148Q9UQR1 794 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 TMX2Q9Y320 296 aa10.49□□□□□ -0.73
GABPA-201ENST00000354828 TMEM88BA6NKF7 163 aa10.48□□□□□ -0.73
GABPA-201ENST00000354828 PQBP1O60828 265 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms