RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 ADGRD2Q7Z7M1 963 aa16.37■□□□□ 0.21
PRPF40A-201ENST00000354363 METTL13Q8N6R0 699 aa16.37■□□□□ 0.21
PRPF40A-201ENST00000354363 POF1BQ8WVV4 589 aa16.37■□□□□ 0.21
PRPF40A-201ENST00000354363 FAM122AQ96E09 287 aa16.37■□□□□ 0.21
PRPF40A-201ENST00000354363 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
PRPF40A-201ENST00000354363 SAMM50Q9Y512 469 aa16.37■□□□□ 0.21
PRPF40A-201ENST00000354363 TBKBP1A7MCY6 615 aa16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 MBTPS2O43462 519 aa16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 REC8O95072 547 aa16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 CLCN3P51790 818 aa16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 SMAD2Q15796 467 aaKnown RBP16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 FAM102BQ5T8I3 360 aa16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 ADHFE1Q8IWW8 467 aa16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 FAM167AQ96KS9 214 aa16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 CEP131Q9UPN4 1083 aa16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 HCN4Q9Y3Q4 1203 aa16.36■□□□□ 0.21
PRPF40A-201ENST00000354363 WDR64B1ANS9 1081 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 MSH4O15457 936 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 MAGEB2O15479 319 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 ZNF862O60290 1169 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 ALADP13716 330 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 DSC3Q14574 896 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 LINC01465Q8N7H1 131 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 PPP2R3CQ969Q6 453 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 CCDC136Q96JN2 1154 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 SH3GLB2Q9NR46 395 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 DISC1Q9NRI5 854 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 RNF216Q9NWF9 866 aaPredicted RBP16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 CD207Q9UJ71 328 aa16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 ARIH1Q9Y4X5 557 aaPredicted RBP16.35■□□□□ 0.21
PRPF40A-201ENST00000354363 USP11P51784 963 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 FAM189BP81408 668 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 SMAD4Q13485 552 aaKnown RBP16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 TOB2Q14106 344 aaPredicted RBP16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 EFCAB12Q6NXP0 572 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 RUFY3Q7L099 469 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 HCSTQ9UBK5 93 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 PCDHB12Q9Y5F1 795 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 PRR33A8MZF0 331 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 DCXO43602 365 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 OATP04181 439 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 NDUFV1P49821 464 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 NLRP11P59045 1033 aaKnown RBP16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 NLRP5P59047 1200 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 PRKCEQ02156 737 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 SPOUT1Q5T280 376 aaKnown RBP16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 LRRC71Q8N4P6 559 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 EFHBQ8N7U6 833 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 SLC5A5Q92911 643 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 MSLNLQ96KJ4 702 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 MAP7D2Q96T17 732 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 RIT2Q99578 217 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 ADAMTS10Q9H324 1103 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 ELAC1Q9H777 363 aaKnown RBP16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 ATP6V0A4Q9HBG4 840 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 ZSWIM6Q9HCJ5 1215 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 AAASQ9NRG9 546 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 TMEM161AQ9NX61 479 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 AKT3Q9Y243 479 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
PRPF40A-201ENST00000354363 GAS7O60861 476 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 FGFR1P11362 822 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 NRIP1P48552 1158 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 UGCGQ16739 394 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 TBCKQ8TEA7 893 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 GJA10Q969M2 543 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 TEKT3Q9BXF9 490 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 UNC45AQ9H3U1 944 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 CWH43Q9H720 699 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 NRBP2Q9NSY0 501 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 TYW1Q9NV66 732 aaKnown RBP16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 CLEC1BQ9P126 229 aa16.33■□□□□ 0.2
PRPF40A-201ENST00000354363 CHMP2AO43633 222 aa16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 EYA4O95677 639 aa16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 TMOD1P28289 359 aa16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 SFNP31947 248 aa16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 UBE3AQ05086 875 aa16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 SSRP1Q08945 709 aaKnown RBP16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 LRCH2Q5VUJ6 765 aa16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 RBM23Q86U06 439 aaKnown RBP16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 TRIM22Q8IYM9 498 aa16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 COLGALT1Q8NBJ5 622 aa16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 PCDHA4Q9UN74 947 aa16.32■□□□□ 0.2
PRPF40A-201ENST00000354363 EPB41L2O43491 1005 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 PSMD10O75832 226 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 FGF18O76093 207 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 GLP2RO95838 553 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 EIF4BP23588 611 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 JAK3P52333 1124 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 Q4G0T1 1027 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 ZNF710Q8N1W2 664 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 ZNF668Q96K58 619 aaPredicted RBP16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 POP1Q99575 1024 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 C22orf23Q9BZE7 217 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 UPF3BQ9BZI7 483 aaKnown RBP16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 TMEM117Q9H0C3 514 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 TLR9Q9NR96 1032 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 RNF19AQ9NV58 838 aa16.31■□□□□ 0.2
PRPF40A-201ENST00000354363 M0R2N6 131 aa16.3■□□□□ 0.2
PRPF40A-201ENST00000354363 DEXIO95424 95 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms