RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 GPSM2P81274 684 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 LACTBP83111 547 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 GRIN1Q05586 938 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 KCNAB2Q13303 367 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 TOMM20Q15388 145 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ZRSR2Q15696 482 aaKnown RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 RCSD1Q6JBY9 416 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 RSPO2Q6UXX9 243 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 KSR1Q8IVT5 923 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 PNISRQ8TF01 805 aaKnown RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 PPM1EQ8WY54 764 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MVB12AQ96EY5 273 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 HSPA12BQ96MM6 686 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 CGRRF1Q99675 332 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ZFYVE21Q9BQ24 234 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MYL10Q9BUA6 226 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 ZNF277Q9NRM2 450 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-202ENST00000354071 RRN3Q9NYV6 651 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 MAGEL2Q9UJ55 1249 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 RNF112Q9ULX5 631 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 NR2E3Q9Y5X4 410 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 HCFC2Q9Y5Z7 792 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 COL24A1Q17RW2 1714 aa2.03□□□□□ -2.08
BRCA1-202ENST00000354071 KIAA1324LA8MWY0 1029 aaPredicted RBP2.03□□□□□ -2.09
BRCA1-202ENST00000354071 TUSC2O75896 110 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 RHOBTB3O94955 611 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 TNFAIP3P21580 790 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 HTR1BP28222 390 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 TEKQ02763 1124 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 LSAMPQ13449 338 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 MYBPC3Q14896 1274 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 CNN3Q15417 329 aaKnown RBP2.03□□□□□ -2.09
BRCA1-202ENST00000354071 TESK1Q15569 626 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 PGS1Q32NB8 556 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 HP1BP3Q5SSJ5 553 aaPredicted RBP2.03□□□□□ -2.09
BRCA1-202ENST00000354071 PHF19Q5T6S3 580 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 HHIPL2Q6UWX4 724 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 TTLL7Q6ZT98 887 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 USP45Q70EL2 814 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 MFSD4AQ8N468 514 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 NKAPQ8N5F7 415 aaKnown RBP2.03□□□□□ -2.09
BRCA1-202ENST00000354071 OR2C3Q8N628 320 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 NSUN6Q8TEA1 469 aaKnown RBP2.03□□□□□ -2.09
BRCA1-202ENST00000354071 WFDC12Q8WWY7 111 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 CLEC4DQ8WXI8 215 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 UBE2FQ969M7 185 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 C16orf92Q96LL3 132 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 MYRFLQ96LU7 910 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 SCLT1Q96NL6 688 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 MAP3K14Q99558 947 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 MYD88Q99836 296 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 MRPL18Q9H0U6 180 aaKnown RBP2.03□□□□□ -2.09
BRCA1-202ENST00000354071 KCTD10Q9H3F6 313 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 BCAS3Q9H6U6 928 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 AKTIPQ9H8T0 292 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 ATP13A1Q9HD20 1204 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 C1orf112Q9NSG2 853 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 GGA3Q9NZ52 723 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 PCDHA13Q9Y5I0 950 aa2.03□□□□□ -2.09
BRCA1-202ENST00000354071 WIZO95785 1651 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 USP19O94966 1318 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 FAM95CA0A1B0GW59 222 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 SART1O43290 800 aaKnown RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ZBED1O96006 694 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PHKG2P15735 406 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 SDHBP21912 280 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 RGS3P49796 1198 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 GALNT1Q10472 559 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ELF2Q15723 593 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 FSCN1Q16658 493 aaKnown RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 E4F1Q66K89 784 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 OTOP3Q7RTS5 596 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 MAP4K3Q8IVH8 894 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 SPACA3Q8IXA5 215 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ZNF655Q8N720 491 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 FBXO18Q8NFZ0 1043 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PLEKHO2Q8TD55 490 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 RILPL2Q969X0 211 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 UTP4Q969X6 686 aaKnown RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 NUP88Q99567 741 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 VPS11Q9H270 941 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 TIMM13Q9Y5L4 95 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 B3GALT1Q9Y5Z6 326 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ACOT7O00154 380 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 HTRA2O43464 458 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 USP2O75604 605 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 NTRK1P04629 796 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 CD97P48960 835 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 GJA9P57773 515 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 POU5F1BQ06416 359 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 PMS2P11Q13670 270 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 HLTFQ14527 1009 aaKnown RBP eCLIP2.02□□□□□ -2.093e-6■■□□□ 13.4
BRCA1-202ENST00000354071 MSMPQ1L6U9 139 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ANO4Q32M45 955 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 GPATCH4Q5T3I0 446 aaKnown RBP2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ANKRD34AQ69YU3 496 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 APOA5Q6Q788 366 aa2.02□□□□□ -2.09
BRCA1-202ENST00000354071 ZDHHC13Q8IUH4 622 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms