RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SUMF1Q8NBK3 374 aa9.25□□□□□ -0.93
CD44-205ENST00000352818 VN1R2Q8NFZ6 395 aa9.25□□□□□ -0.93
CD44-205ENST00000352818 WNT8BQ93098 351 aa9.25□□□□□ -0.93
CD44-205ENST00000352818 CLIC6Q96NY7 704 aa9.25□□□□□ -0.93
CD44-205ENST00000352818 PYM1Q9BRP8 204 aaKnown RBP9.25□□□□□ -0.93
CD44-205ENST00000352818 MTG1Q9BT17 334 aaPredicted RBP9.25□□□□□ -0.93
CD44-205ENST00000352818 SEMA4AQ9H3S1 761 aa9.25□□□□□ -0.93
CD44-205ENST00000352818 RIOX1Q9H6W3 641 aa9.25□□□□□ -0.93
CD44-205ENST00000352818 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.25□□□□□ -0.93
CD44-205ENST00000352818 STX8Q9UNK0 236 aa9.25□□□□□ -0.93
CD44-205ENST00000352818 NBEAQ8NFP9 2946 aa9.25□□□□□ -0.93
CD44-205ENST00000352818 hCG_1642624A0A1W2PR95 340 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 FAM205CA6NFA0 338 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 GOLGA6L19H0YKK7 550 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 MPHOSPH10O00566 681 aaKnown RBP9.24□□□□□ -0.93
CD44-205ENST00000352818 CYTH3O43739 400 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 MYL3P08590 195 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 PDHBP11177 359 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 ATF7P17544 494 aaPredicted RBP9.24□□□□□ -0.93
CD44-205ENST00000352818 ZNF75DP51815 510 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 IKBKEQ14164 716 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 NT5DC1Q5TFE4 455 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 ARL6IP4Q66PJ3 421 aaKnown RBP9.24□□□□□ -0.93
CD44-205ENST00000352818 IQSEC1Q6DN90 963 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 MYOCDQ8IZQ8 938 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 EFHBQ8N7U6 833 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 TRIML1Q8N9V2 468 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 DTWD2Q8NBA8 298 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 CAGE1Q8TC20 777 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 RRP36Q96EU6 259 aaKnown RBP9.24□□□□□ -0.93
CD44-205ENST00000352818 CCDC34Q96HJ3 373 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 MRFAP1L1Q96HT8 127 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 OSBPL7Q9BZF2 842 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 ZMYND12Q9H0C1 365 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 LMAN2LQ9H0V9 348 aa9.24□□□□□ -0.93
CD44-205ENST00000352818 BECN2A8MW95 431 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 KLRF2D3W0D1 207 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 LAD1O00515 517 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 ATP2A1O14983 1001 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 ACTN4O43707 911 aaKnown RBP9.23□□□□□ -0.93
CD44-205ENST00000352818 EFCAB14O75071 495 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 TTLL1O95922 423 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 CKBP12277 381 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 AKR1B1P15121 316 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 SP100P23497 879 aaPredicted RBP9.23□□□□□ -0.93
CD44-205ENST00000352818 GRIN1Q05586 938 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 PTGISQ16647 500 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 TRIM71Q2Q1W2 868 aaKnown RBP9.23□□□□□ -0.93
CD44-205ENST00000352818 DPCR1Q3MIW9 517 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 CT47A1Q5JQC4 288 aaPredicted RBP9.23□□□□□ -0.93
CD44-205ENST00000352818 FAM83BQ5T0W9 1011 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 GDF6Q6KF10 455 aaPredicted RBP9.23□□□□□ -0.93
CD44-205ENST00000352818 PIK3AP1Q6ZUJ8 805 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 EEPD1Q7L9B9 569 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 KRT25Q7Z3Z0 450 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 UBALD2Q8IYN6 164 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 CNNM3Q8NE01 707 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 SPATA20Q8TB22 786 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 NUP88Q99567 741 aaPredicted RBP9.23□□□□□ -0.93
CD44-205ENST00000352818 CSRNP2Q9H175 543 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 SYNPO2Q9UMS6 1093 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.23□□□□□ -0.93
CD44-205ENST00000352818 DSPP15924 2871 aaKnown RBP9.23□□□□□ -0.93
CD44-205ENST00000352818 LAMA5O15230 3695 aa9.23□□□□□ -0.93
CD44-205ENST00000352818 CCDC194A0A1B0GVG4 234 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 SMTNL1A8MU46 457 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 AOC1P19801 751 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 TGM1P22735 817 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 GNA11P29992 359 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 CTNNB1P35222 781 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 LONP1P36776 959 aaKnown RBP9.22□□□□□ -0.93
CD44-205ENST00000352818 BMPR1AP36894 532 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 PRPHP41219 470 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 SARSP49591 514 aaKnown RBP9.22□□□□□ -0.93
CD44-205ENST00000352818 PTPN11Q06124 597 aaPredicted RBP9.22□□□□□ -0.93
CD44-205ENST00000352818 ZNF543Q08ER8 600 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 POSTNQ15063 836 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 LONRF3Q496Y0 759 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 DUSP28Q4G0W2 176 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 GPATCH4Q5T3I0 446 aaKnown RBP9.22□□□□□ -0.93
CD44-205ENST00000352818 TYW1BQ6NUM6 668 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 TMEM179Q6ZVK1 233 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 HEATR3Q7Z4Q2 680 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 ANKRD35Q8N283 1001 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 AOPEPQ8N6M6 819 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 C4orf32Q8N8J7 132 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 DBF4BQ8NFT6 615 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 GPKOWQ92917 476 aaPredicted RBP eCLIP9.22□□□□□ -0.93
CD44-205ENST00000352818 TOP1MTQ969P6 601 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 MKL1Q969V6 931 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 MTMR8Q96EF0 704 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 YME1L1Q96TA2 773 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 HINFPQ9BQA5 517 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 S1PR5Q9H228 398 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 RAVER2Q9HCJ3 691 aaKnown RBP9.22□□□□□ -0.93
CD44-205ENST00000352818 C6orf50Q9HD87 102 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 NYAP2Q9P242 653 aa9.22□□□□□ -0.93
CD44-205ENST00000352818 SEC63Q9UGP8 760 aaKnown RBP9.22□□□□□ -0.93
CD44-205ENST00000352818 CDH22Q9UJ99 828 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms