RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 DCAF17Q5H9S7 520 aaPredicted RBP18.3■□□□□ 0.52
SAMM50-201ENST00000350028 TCERG1LQ5VWI1 586 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 DPY19L2P1Q6NXN4 242 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 CATSPERGQ6ZRH7 1159 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 CTAGE6Q86UF2 777 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 NLRX1Q86UT6 975 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 CTAGE4Q8IX94 777 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 DAW1Q8N136 415 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 SLC35C1Q96A29 364 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 GPRASP2Q96D09 838 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 ARID3AQ99856 593 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 FBXL5Q9UKA1 691 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 RIPK3Q9Y572 518 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 SAR1BQ9Y6B6 198 aa18.3■□□□□ 0.52
SAMM50-201ENST00000350028 WDR64B1ANS9 1081 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 PPP1R37O75864 691 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 LMNB1P20700 586 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 PON1P27169 355 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 PSMC5P62195 406 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 RAPGEF1Q13905 1077 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 KLHDC7AQ5VTJ3 777 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 SNRNP48Q6IEG0 339 aaKnown RBP18.29■□□□□ 0.52
SAMM50-201ENST00000350028 VSIG10LQ86VR7 867 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 SLC9A9Q8IVB4 645 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 TRIM58Q8NG06 486 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 WNK4Q96J92 1243 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 AGPAT3Q9NRZ7 376 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 ANKEF1Q9NU02 776 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 MYPNQ86TC9 1320 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 COL11A1P12107 1806 aaPredicted RBP18.29■□□□□ 0.52
SAMM50-201ENST00000350028 ATP1A1P05023 1023 aaKnown RBP18.29■□□□□ 0.52
SAMM50-201ENST00000350028 NR3C2P08235 984 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 SLC9A1P19634 815 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 TMCO3Q6UWJ1 677 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 CCDC43Q96MW1 224 aaKnown RBP18.29■□□□□ 0.52
SAMM50-201ENST00000350028 SENP7Q9BQF6 1050 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 TMEM206Q9H813 350 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 HOXC10Q9NYD6 342 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 ZNF214Q9UL59 606 aaPredicted RBP18.29■□□□□ 0.52
SAMM50-201ENST00000350028 FRMD4BQ9Y2L6 1034 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 BZW2Q9Y6E2 419 aaKnown RBP18.29■□□□□ 0.52
SAMM50-201ENST00000350028 DUSP10Q9Y6W6 482 aa18.29■□□□□ 0.52
SAMM50-201ENST00000350028 MACROD2A1Z1Q3 448 aa18.28■□□□□ 0.52
SAMM50-201ENST00000350028 TESPA1A2RU30 521 aaPredicted RBP18.28■□□□□ 0.52
SAMM50-201ENST00000350028 ATP9AO75110 1047 aa18.28■□□□□ 0.52
SAMM50-201ENST00000350028 YWHABP31946 246 aaKnown RBP18.28■□□□□ 0.52
SAMM50-201ENST00000350028 HIRAP54198 1017 aaPredicted RBP18.28■□□□□ 0.52
SAMM50-201ENST00000350028 KLHL30Q0D2K2 578 aa18.28■□□□□ 0.52
SAMM50-201ENST00000350028 BMS1Q14692 1282 aaKnown RBP18.28■□□□□ 0.52
SAMM50-201ENST00000350028 PPP2R5AQ15172 486 aa18.28■□□□□ 0.52
SAMM50-201ENST00000350028 GPR162Q16538 588 aa18.28■□□□□ 0.52
SAMM50-201ENST00000350028 ZNF746Q6NUN9 644 aaPredicted RBP18.28■□□□□ 0.52
SAMM50-201ENST00000350028 SYCP3Q8IZU3 236 aa18.28■□□□□ 0.52
SAMM50-201ENST00000350028 NSUN6Q8TEA1 469 aaKnown RBP18.28■□□□□ 0.52
SAMM50-201ENST00000350028 PARD6BQ9BYG5 372 aa18.28■□□□□ 0.52
SAMM50-201ENST00000350028 AFG3L2Q9Y4W6 797 aa18.28■□□□□ 0.52
SAMM50-201ENST00000350028 K7ENM7 598 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 ACTN1P12814 892 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 PLS3P13797 630 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 UCHL3P15374 230 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 APBA1Q02410 837 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 GFPT1Q06210 699 aaPredicted RBP18.27■□□□□ 0.52
SAMM50-201ENST00000350028 CKAP4Q07065 602 aaKnown RBP18.27■□□□□ 0.52
SAMM50-201ENST00000350028 TMEM132BQ14DG7 1078 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 SH3D19Q5HYK7 790 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 KSR1Q8IVT5 923 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 RNF10Q8N5U6 811 aaKnown RBP18.27■□□□□ 0.52
SAMM50-201ENST00000350028 SLC17A8Q8NDX2 589 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 TMEM174Q8WUU8 243 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 ACCSQ96QU6 501 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 SPAG5Q96R06 1193 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 TEX13BQ9BXU2 312 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 ZNF446Q9NWS9 450 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 JRKLQ9Y4A0 524 aa18.27■□□□□ 0.52
SAMM50-201ENST00000350028 ENC1O14682 589 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 ATP8B1O43520 1251 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 ZSCAN20P17040 1043 aaPredicted RBP18.26■□□□□ 0.51
SAMM50-201ENST00000350028 SLC18A3Q16572 532 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 MSANTD4Q8NCY6 345 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.26■□□□□ 0.51
SAMM50-201ENST00000350028 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
SAMM50-201ENST00000350028 RPGRIP1Q96KN7 1286 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 DRC1Q96MC2 740 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 INPP4AQ96PE3 977 aaPredicted RBP18.26■□□□□ 0.51
SAMM50-201ENST00000350028 ALS2CR12Q96Q35 445 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 MOV10L1Q9BXT6 1211 aaKnown RBP18.26■□□□□ 0.51
SAMM50-201ENST00000350028 ST6GALNAC4Q9H4F1 302 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 ACAD9Q9H845 621 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 FZD1Q9UP38 647 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 SSC5DA1L4H1 1573 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 SPDYE4A6NLX3 237 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 DKC1O60832 514 aaKnown RBP eCLIP18.26■□□□□ 0.51
SAMM50-201ENST00000350028 STAM2O75886 525 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 CCNE2O96020 404 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 TUBBP07437 444 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 ANXA13P27216 316 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 SNRPFP62306 86 aaKnown RBP18.26■□□□□ 0.51
SAMM50-201ENST00000350028 BRD3Q15059 726 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 C10orf76Q5T2E6 689 aa18.26■□□□□ 0.51
SAMM50-201ENST00000350028 C12orf56Q8IXR9 622 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms