RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 Q7L0L9 218 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 BRAPQ7Z569 592 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 HSCBQ8IWL3 235 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 TPH2Q8IWU9 490 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 ZNF710Q8N1W2 664 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 TMEM40Q8WWA1 233 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 MAP7D2Q96T17 732 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 TTYH1Q9H313 450 aaPredicted RBP24.73■■□□□ 1.55
SNX3-202ENST00000349379 DHX33Q9H6R0 707 aaKnown RBP24.73■■□□□ 1.55
SNX3-202ENST00000349379 CDHR5Q9HBB8 845 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 YBX2Q9Y2T7 364 aaKnown RBP24.73■■□□□ 1.55
SNX3-202ENST00000349379 PCDHA11Q9Y5I1 949 aa24.73■■□□□ 1.55
SNX3-202ENST00000349379 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.72■■□□□ 1.55
SNX3-202ENST00000349379 CD52P31358 61 aa24.72■■□□□ 1.55
SNX3-202ENST00000349379 RABGGTBP53611 331 aa24.72■■□□□ 1.55
SNX3-202ENST00000349379 CRYBB1P53674 252 aaPredicted RBP24.72■■□□□ 1.55
SNX3-202ENST00000349379 ATP2C1P98194 919 aaPredicted RBP24.72■■□□□ 1.55
SNX3-202ENST00000349379 DEFB123Q8N688 67 aa24.72■■□□□ 1.55
SNX3-202ENST00000349379 ZNF579Q8NAF0 562 aaKnown RBP24.72■■□□□ 1.55
SNX3-202ENST00000349379 TIFAQ96CG3 184 aa24.72■■□□□ 1.55
SNX3-202ENST00000349379 POLR3CQ9BUI4 534 aaPredicted RBP24.72■■□□□ 1.55
SNX3-202ENST00000349379 ADAMTS10Q9H324 1103 aa24.72■■□□□ 1.55
SNX3-202ENST00000349379 TUFT1Q9NNX1 390 aa24.72■■□□□ 1.55
SNX3-202ENST00000349379 ZBTB39O15060 712 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 KIZQ2M2Z5 673 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 TMEM266Q2M3C6 531 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 OTUD6AQ7L8S5 288 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 CATSPER3Q86XQ3 398 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 IGSF22Q8N9C0 903 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 CEP170P1Q96L14 293 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 JPH2Q9BR39 696 aaPredicted RBP24.71■■□□□ 1.55
SNX3-202ENST00000349379 SUGCTQ9HAC7 445 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 ANKEF1Q9NU02 776 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 MTMR10Q9NXD2 777 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 MSRAQ9UJ68 235 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 AKT3Q9Y243 479 aa24.71■■□□□ 1.55
SNX3-202ENST00000349379 VPS37CA5D8V6 355 aaPredicted RBP24.7■■□□□ 1.54
SNX3-202ENST00000349379 MED24O75448 989 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 GJB5O95377 273 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 XRCC6P12956 609 aaKnown RBP eCLIP24.7■■□□□ 1.54
SNX3-202ENST00000349379 RPA1P27694 616 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 GPC3P51654 580 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 PDIA5Q14554 519 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 IL17AQ16552 155 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 FAM43BQ6ZT52 329 aaPredicted RBP24.7■■□□□ 1.54
SNX3-202ENST00000349379 OSMRQ99650 979 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 SEMA6BQ9H3T3 888 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 ERVK-5Q9HDB9 667 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 FOXD4L1Q9NU39 408 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 PADI3Q9ULW8 664 aa24.7■■□□□ 1.54
SNX3-202ENST00000349379 NOC2LQ9Y3T9 749 aaKnown RBP24.7■■□□□ 1.54
SNX3-202ENST00000349379 COL4A6Q14031 1691 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 AMHP03971 560 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 MYOGP15173 224 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 RFC5P40937 340 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 NLRP11P59045 1033 aaKnown RBP24.69■■□□□ 1.54
SNX3-202ENST00000349379 RESTQ13127 1097 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 XKR9Q5GH70 373 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 TMCO2Q7Z6W1 182 aaPredicted RBP24.69■■□□□ 1.54
SNX3-202ENST00000349379 EXOC8Q8IYI6 725 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 ERMNQ8TAM6 284 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 LINC01599Q8WXQ3 324 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 MTMR6Q9Y217 621 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 GINS2Q9Y248 185 aa24.69■■□□□ 1.54
SNX3-202ENST00000349379 NLRC5Q86WI3 1866 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 MUTP22033 750 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 RARRES1P49788 294 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 PAK2Q13177 524 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 FERMT3Q86UX7 667 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 SLC7A3Q8WY07 619 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 TOP1MTQ969P6 601 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 PPP1R16BQ96T49 567 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 FTHL17Q9BXU8 183 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 NKX2-4Q9H2Z4 354 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 TMX1Q9H3N1 280 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 CDH23Q9H251 3354 aa24.68■■□□□ 1.54
SNX3-202ENST00000349379 GAS2O43903 313 aaKnown RBP24.67■■□□□ 1.54
SNX3-202ENST00000349379 RPS6KA5O75582 802 aa24.67■■□□□ 1.54
SNX3-202ENST00000349379 POLGP54098 1239 aaPredicted RBP24.67■■□□□ 1.54
SNX3-202ENST00000349379 CDC42EP1Q00587 391 aa24.67■■□□□ 1.54
SNX3-202ENST00000349379 HAUS3Q68CZ6 603 aa24.67■■□□□ 1.54
SNX3-202ENST00000349379 RTN4RL1Q86UN2 441 aaPredicted RBP24.67■■□□□ 1.54
SNX3-202ENST00000349379 FAM228AQ86W67 206 aa24.67■■□□□ 1.54
SNX3-202ENST00000349379 GUCD1Q96NT3 240 aa24.67■■□□□ 1.54
SNX3-202ENST00000349379 RAB34Q9BZG1 259 aa24.67■■□□□ 1.54
SNX3-202ENST00000349379 ZNF576Q9H609 170 aa24.67■■□□□ 1.54
SNX3-202ENST00000349379 XPNPEP1Q9NQW7 623 aa24.67■■□□□ 1.54
SNX3-202ENST00000349379 LRWD1Q9UFC0 647 aa24.67■■□□□ 1.54
SNX3-202ENST00000349379 ENPP3O14638 875 aa24.66■■□□□ 1.54
SNX3-202ENST00000349379 EIF4BP23588 611 aaKnown RBP24.66■■□□□ 1.54
SNX3-202ENST00000349379 DNM2P50570 870 aa24.66■■□□□ 1.54
SNX3-202ENST00000349379 EMC2Q15006 297 aa24.66■■□□□ 1.54
SNX3-202ENST00000349379 ODR4Q5SWX8 454 aa24.66■■□□□ 1.54
SNX3-202ENST00000349379 ARL6IP4Q66PJ3 421 aaKnown RBP24.66■■□□□ 1.54
SNX3-202ENST00000349379 DTHD1Q6ZMT9 781 aa24.66■■□□□ 1.54
SNX3-202ENST00000349379 MYOCDQ8IZQ8 938 aa24.66■■□□□ 1.54
SNX3-202ENST00000349379 PIGOQ8TEQ8 1089 aa24.66■■□□□ 1.54
SNX3-202ENST00000349379 TSPYL2Q9H2G4 693 aaPredicted RBP24.66■■□□□ 1.54
SNX3-202ENST00000349379 SUCLA2Q9P2R7 463 aaPredicted RBP24.66■■□□□ 1.54
SNX3-202ENST00000349379 RALGAPA2Q2PPJ7 1873 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms