RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ERP27Q96DN0 273 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 SLC12A4Q9UP95 1085 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 TMEM120BA0PK00 339 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 DR1Q01658 176 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 LRRC23Q53EV4 343 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-201ENST00000349038 ANO7Q6IWH7 933 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 SV2BQ7L1I2 683 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 ZSCAN29Q8IWY8 852 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-201ENST00000349038 MAGEC3Q8TD91 643 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 ZNF317Q96PQ6 595 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-201ENST00000349038 TSG101Q99816 390 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 KLHL14Q9P2G3 628 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 CACNA1SQ13698 1873 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 SERPING1P05155 500 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 GBP1P32455 592 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 SERPINB4P48594 390 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 PDE6CP51160 858 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 KCNQ4P56696 695 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 RNF25Q96BH1 459 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-201ENST00000349038 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.4■□□□□ 0.223e-9■■□□□ 12.7
PTBP1-201ENST00000349038 CNOT10Q9H9A5 744 aaKnown RBP16.4■□□□□ 0.22
PTBP1-201ENST00000349038 ATP6V0A2Q9Y487 856 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 ZNF804BA4D1E1 1349 aa16.4■□□□□ 0.22
PTBP1-201ENST00000349038 CFAP73A6NFT4 308 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 CCDC169A6NNP5 214 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 SNX3O60493 162 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 GHRP10912 638 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 CALML3P27482 149 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 HNRNPH3P31942 346 aaKnown RBP16.39■□□□□ 0.21
PTBP1-201ENST00000349038 SLC18A3Q16572 532 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 AGBL2Q5U5Z8 902 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 CCNJLQ8IV13 435 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 CCHCR1Q8TD31 782 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 C18orf8Q96DM3 657 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 DYDC2Q96IM9 177 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 CCSER1Q9C0I3 900 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 GGA2Q9UJY4 613 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 MYMKA6NI61 221 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 CBX6O95503 412 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 SUSD4Q5VX71 490 aa16.39■□□□□ 0.21
PTBP1-201ENST00000349038 SRRM1Q8IYB3 904 aaKnown RBP16.39■□□□□ 0.21
PTBP1-201ENST00000349038 COL1A1P02452 1464 aaPredicted RBP16.39■□□□□ 0.21
PTBP1-201ENST00000349038 WDR91A4D1P6 747 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 MYH7BA7E2Y1 1941 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 CETN3O15182 167 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 LUC7L3O95232 432 aaKnown RBP16.38■□□□□ 0.21
PTBP1-201ENST00000349038 TNFRSF8P28908 595 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 EPHB2P29323 1055 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 ZNF268Q14587 947 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-201ENST00000349038 TRIM74Q86UV6 250 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 TRIM73Q86UV7 250 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-201ENST00000349038 ERVK-5Q9HDB9 667 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 RNF14Q9UBS8 474 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 GSTTP1A0A1W2PQM5 241 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 C5orf60A6NFR6 353 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 M0R2N6 131 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 SPAG7O75391 227 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 GYG1P46976 350 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 NAPAP54920 295 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 BARGINQ6ZT62 677 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 CTNNBL1Q8WYA6 563 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-201ENST00000349038 PWWP2AQ96N64 755 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
PTBP1-201ENST00000349038 SERPINA10Q9UK55 444 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 GFPT2O94808 682 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 CRELD2Q6UXH1 353 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-201ENST00000349038 SPATA21Q7Z572 469 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 CCDC105Q8IYK2 499 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 SPOCK2Q92563 424 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
PTBP1-201ENST00000349038 PCDHA4Q9UN74 947 aa16.38■□□□□ 0.21
PTBP1-201ENST00000349038 BAZ2AQ9UIF9 1905 aaKnown RBP16.37■□□□□ 0.21
PTBP1-201ENST00000349038 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
PTBP1-201ENST00000349038 A0A1W2PRG0 241 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 LCA5LO95447 670 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 PYGBP11216 843 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
PTBP1-201ENST00000349038 AMPD3Q01432 767 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 CHRNDQ07001 517 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 CWF19L1Q69YN2 538 aaKnown RBP16.37■□□□□ 0.21
PTBP1-201ENST00000349038 TRMT1LQ7Z2T5 733 aaKnown RBP16.37■□□□□ 0.21
PTBP1-201ENST00000349038 TRIM7Q9C029 511 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 RAB17Q9H0T7 212 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 SH3GLB2Q9NR46 395 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 BICDL1Q6ZP65 573 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 ZNF571Q7Z3V5 609 aaPredicted RBP16.37■□□□□ 0.21
PTBP1-201ENST00000349038 ZNF384Q8TF68 577 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 ATXN2LQ8WWM7 1075 aaKnown RBP16.37■□□□□ 0.21
PTBP1-201ENST00000349038 IQCDQ96DY2 449 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 FGD4Q96M96 766 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 FAM118BQ9BPY3 351 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 FGFBP2Q9BYJ0 223 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 ABCA3Q99758 1704 aa16.37■□□□□ 0.21
PTBP1-201ENST00000349038 FERP16591 822 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 KLC1Q07866 573 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 ADAM9Q13443 819 aa16.36■□□□□ 0.21
PTBP1-201ENST00000349038 RBM26Q5T8P6 1007 aaKnown RBP16.36■□□□□ 0.21
PTBP1-201ENST00000349038 ITGB4P16144 1822 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms