RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 KIFAP3Q92845 792 aa20.59■□□□□ 0.89
PTN-201ENST00000348225 FAM167AQ96KS9 214 aa20.59■□□□□ 0.89
PTN-201ENST00000348225 FIZ1Q96SL8 496 aa20.59■□□□□ 0.89
PTN-201ENST00000348225 GPR20Q99678 358 aa20.59■□□□□ 0.89
PTN-201ENST00000348225 SH2D3AQ9BRG2 576 aa20.59■□□□□ 0.89
PTN-201ENST00000348225 ITIH6Q6UXX5 1313 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 RBM47A0AV96 593 aaKnown RBP20.58■□□□□ 0.89
PTN-201ENST00000348225 LGALS16A8MUM7 142 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 K7ENM7 598 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 TEX33O43247 280 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 TOMM70O94826 608 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 FAM102BQ5T8I3 360 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 LRRC8AQ8IWT6 810 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 ZC3H3Q8IXZ2 948 aaKnown RBP20.58■□□□□ 0.89
PTN-201ENST00000348225 EEF2KMTQ96G04 330 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 SPATA33Q96N06 139 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 KCNF1Q9H3M0 494 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 C17orf75Q9HAS0 396 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 ATP6V0A4Q9HBG4 840 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 NRBP2Q9NSY0 501 aa20.58■□□□□ 0.89
PTN-201ENST00000348225 CETN3O15182 167 aa20.57■□□□□ 0.88
PTN-201ENST00000348225 NRDCO43847 1150 aa20.57■□□□□ 0.88
PTN-201ENST00000348225 SFPQP23246 707 aaKnown RBP eCLIP20.57■□□□□ 0.88
PTN-201ENST00000348225 RPL13P26373 211 aaKnown RBP20.57■□□□□ 0.88
PTN-201ENST00000348225 PBX1P40424 430 aa20.57■□□□□ 0.88
PTN-201ENST00000348225 TM4SF4P48230 202 aa20.57■□□□□ 0.88
PTN-201ENST00000348225 MTERF2Q49AM1 385 aa20.57■□□□□ 0.88
PTN-201ENST00000348225 TAPT1Q6NXT6 567 aa20.57■□□□□ 0.88
PTN-201ENST00000348225 PAXIP1Q6ZW49 1069 aaPredicted RBP20.57■□□□□ 0.88
PTN-201ENST00000348225 TINF2Q9BSI4 451 aa20.57■□□□□ 0.88
PTN-201ENST00000348225 NOC4LQ9BVI4 516 aaKnown RBP20.57■□□□□ 0.88
PTN-201ENST00000348225 PDGFCQ9NRA1 345 aa20.57■□□□□ 0.88
PTN-201ENST00000348225 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.57■□□□□ 0.88
PTN-201ENST00000348225 PES1O00541 588 aaKnown RBP20.56■□□□□ 0.88
PTN-201ENST00000348225 LGR5O75473 907 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 ATP4AP20648 1035 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 HOXD13P35453 343 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 DNM2P50570 870 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 UBXN1Q04323 297 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 MAP2K5Q13163 448 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 LAMC2Q13753 1193 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 GOLGA5Q8TBA6 731 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 CACTINQ8WUQ7 758 aaKnown RBP20.56■□□□□ 0.88
PTN-201ENST00000348225 PCYT2Q99447 389 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 NIFKQ9BYG3 293 aaKnown RBP20.56■□□□□ 0.88
PTN-201ENST00000348225 PPME1Q9Y570 386 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 EMSYQ7Z589 1322 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 GH1P01241 217 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 NR2F2P24468 414 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 SMTNP53814 917 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 POLGP54098 1239 aaPredicted RBP20.56■□□□□ 0.88
PTN-201ENST00000348225 TBX2Q13207 712 aaPredicted RBP20.56■□□□□ 0.88
PTN-201ENST00000348225 DMP1Q13316 513 aaPredicted RBP20.56■□□□□ 0.88
PTN-201ENST00000348225 ADAM9Q13443 819 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 MAN2A1Q16706 1144 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 HSDL1Q3SXM5 330 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 CCDC40Q4G0X9 1142 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 ZC2HC1CQ53FD0 456 aaPredicted RBP20.56■□□□□ 0.88
PTN-201ENST00000348225 MORN1Q5T089 497 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 HS2ST1Q7LGA3 356 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 PLPPR4Q7Z2D5 763 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 GLG1Q92896 1179 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 KATNBL1Q9H079 304 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 ABHD16BQ9H3Z7 469 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 ST6GALNAC4Q9H4F1 302 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 TMEM206Q9H813 350 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 KCNG1Q9UIX4 513 aa20.56■□□□□ 0.88
PTN-201ENST00000348225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.56■□□□□ 0.88
PTN-201ENST00000348225 A0A1W2PQC6 194 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 PPP1R37O75864 691 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 TPM1P09493 284 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 RFC5P40937 340 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 SLC26A2P50443 739 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 PEX3P56589 373 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 RTP1P59025 263 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 NFIL3Q16649 462 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 STRA6Q9BX79 667 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 GPRC5CQ9NQ84 441 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 PDLIM7Q9NR12 457 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 ZMYM2Q9UBW7 1377 aa20.55■□□□□ 0.88
PTN-201ENST00000348225 SNAI1O95863 264 aaPredicted RBP20.54■□□□□ 0.88
PTN-201ENST00000348225 ALDH1A1P00352 501 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 NR3C1P04150 777 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 NCKAP1LP55160 1127 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 MARSP56192 900 aaKnown RBP20.54■□□□□ 0.88
PTN-201ENST00000348225 LRMPQ12912 555 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 CRHR2Q13324 411 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 IRF5Q13568 498 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 TRIM14Q14142 442 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 EMC2Q15006 297 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 PTPN21Q16825 1174 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 FKBP15Q5T1M5 1219 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 PPFIBP1Q86W92 1011 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 NPLOC4Q8TAT6 608 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 SOCS4Q8WXH5 440 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 SLC7A3Q8WY07 619 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 COPS5Q92905 334 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 EMID1Q96A84 441 aaPredicted RBP20.54■□□□□ 0.88
PTN-201ENST00000348225 GBP3Q9H0R5 595 aa20.54■□□□□ 0.88
PTN-201ENST00000348225 CA12O43570 354 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms